Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a6O35544 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a6O35544 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a6O35544 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc1a6O35544 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Slc1a6O35544 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Slc1a6O35544 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Slc1a6O35544 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Slc1a6O35544 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc1a6O35544 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slc1a6O35544 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.83■□□□□ 0.92
Slc1a6O35544 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a6O35544 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a6O35544 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.82■□□□□ 0.92
Slc1a6O35544 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a6O35544 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a6O35544 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.82■□□□□ 0.92
Slc1a6O35544 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a6O35544 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a6O35544 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
Slc1a6O35544 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a6O35544 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc1a6O35544 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Slc1a6O35544 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.82■□□□□ 0.92
Slc1a6O35544 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a6O35544 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a6O35544 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a6O35544 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Slc1a6O35544 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a6O35544 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Slc1a6O35544 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a6O35544 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Slc1a6O35544 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.81■□□□□ 0.92
Slc1a6O35544 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc1a6O35544 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc1a6O35544 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc1a6O35544 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Slc1a6O35544 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc1a6O35544 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc1a6O35544 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc1a6O35544 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc1a6O35544 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc1a6O35544 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.79■□□□□ 0.92
Slc1a6O35544 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc1a6O35544 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Slc1a6O35544 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc1a6O35544 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc1a6O35544 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc1a6O35544 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc1a6O35544 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.78■□□□□ 0.92
Slc1a6O35544 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.78■□□□□ 0.92
Slc1a6O35544 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Slc1a6O35544 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Slc1a6O35544 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Slc1a6O35544 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc1a6O35544 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Slc1a6O35544 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.77■□□□□ 0.92
Slc1a6O35544 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Slc1a6O35544 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Slc1a6O35544 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Slc1a6O35544 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Slc1a6O35544 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Slc1a6O35544 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc1a6O35544 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc1a6O35544 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc1a6O35544 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Slc1a6O35544 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc1a6O35544 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc1a6O35544 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Slc1a6O35544 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Slc1a6O35544 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc1a6O35544 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Slc1a6O35544 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc1a6O35544 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc1a6O35544 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a6O35544 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a6O35544 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a6O35544 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a6O35544 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a6O35544 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a6O35544 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a6O35544 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a6O35544 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a6O35544 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc1a6O35544 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc1a6O35544 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc1a6O35544 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Slc1a6O35544 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.74■□□□□ 0.91
Slc1a6O35544 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
Slc1a6O35544 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc1a6O35544 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc1a6O35544 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc1a6O35544 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Slc1a6O35544 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc1a6O35544 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc1a6O35544 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc1a6O35544 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc1a6O35544 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Slc1a6O35544 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc1a6O35544 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms