Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clk4O35493 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clk4O35493 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clk4O35493 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clk4O35493 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clk4O35493 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clk4O35493 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.21■□□□□ 0.83
Clk4O35493 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clk4O35493 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clk4O35493 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clk4O35493 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clk4O35493 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Clk4O35493 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clk4O35493 Gm13238-201ENSMUST00000117655 780 ntBASIC20.2■□□□□ 0.82
Clk4O35493 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Clk4O35493 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clk4O35493 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clk4O35493 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.2■□□□□ 0.82
Clk4O35493 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clk4O35493 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Clk4O35493 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Clk4O35493 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clk4O35493 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clk4O35493 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clk4O35493 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Clk4O35493 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clk4O35493 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.19■□□□□ 0.82
Clk4O35493 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Clk4O35493 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clk4O35493 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.18■□□□□ 0.82
Clk4O35493 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Clk4O35493 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Clk4O35493 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clk4O35493 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clk4O35493 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.18■□□□□ 0.82
Clk4O35493 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clk4O35493 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clk4O35493 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Clk4O35493 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.17■□□□□ 0.82
Clk4O35493 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clk4O35493 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clk4O35493 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clk4O35493 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clk4O35493 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Clk4O35493 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
Clk4O35493 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Clk4O35493 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clk4O35493 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clk4O35493 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Clk4O35493 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clk4O35493 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clk4O35493 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clk4O35493 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clk4O35493 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.15■□□□□ 0.82
Clk4O35493 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Clk4O35493 Gm5812-201ENSMUST00000061073 957 ntBASIC20.15■□□□□ 0.82
Clk4O35493 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clk4O35493 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clk4O35493 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clk4O35493 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clk4O35493 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Clk4O35493 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Clk4O35493 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clk4O35493 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Clk4O35493 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clk4O35493 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Clk4O35493 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Clk4O35493 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Clk4O35493 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clk4O35493 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clk4O35493 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clk4O35493 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clk4O35493 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clk4O35493 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clk4O35493 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Clk4O35493 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
Clk4O35493 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clk4O35493 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Clk4O35493 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Clk4O35493 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Clk4O35493 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.12■□□□□ 0.81
Clk4O35493 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.12■□□□□ 0.81
Clk4O35493 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Clk4O35493 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Clk4O35493 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.12■□□□□ 0.81
Clk4O35493 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.12■□□□□ 0.81
Clk4O35493 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.12■□□□□ 0.81
Clk4O35493 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.12■□□□□ 0.81
Clk4O35493 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clk4O35493 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clk4O35493 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clk4O35493 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clk4O35493 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clk4O35493 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Clk4O35493 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clk4O35493 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.11■□□□□ 0.81
Clk4O35493 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Clk4O35493 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Clk4O35493 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Clk4O35493 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms