Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfsf11O35235 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Tnfsf11O35235 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.47■□□□□ 0.23
Tnfsf11O35235 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfsf11O35235 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfsf11O35235 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfsf11O35235 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfsf11O35235 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfsf11O35235 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfsf11O35235 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfsf11O35235 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.46■□□□□ 0.23
Tnfsf11O35235 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfsf11O35235 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfsf11O35235 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfsf11O35235 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.45■□□□□ 0.22
Tnfsf11O35235 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Tnfsf11O35235 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Tnfsf11O35235 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfsf11O35235 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Tnfsf11O35235 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.45■□□□□ 0.22
Tnfsf11O35235 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.45■□□□□ 0.22
Tnfsf11O35235 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Tnfsf11O35235 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Tnfsf11O35235 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfsf11O35235 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfsf11O35235 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfsf11O35235 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.44■□□□□ 0.22
Tnfsf11O35235 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC16.44■□□□□ 0.22
Tnfsf11O35235 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfsf11O35235 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfsf11O35235 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfsf11O35235 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfsf11O35235 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfsf11O35235 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfsf11O35235 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfsf11O35235 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfsf11O35235 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfsf11O35235 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfsf11O35235 Gm8503-201ENSMUST00000118131 455 ntBASIC16.43■□□□□ 0.22
Tnfsf11O35235 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.43■□□□□ 0.22
Tnfsf11O35235 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfsf11O35235 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfsf11O35235 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfsf11O35235 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfsf11O35235 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfsf11O35235 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfsf11O35235 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfsf11O35235 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Tnfsf11O35235 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.42■□□□□ 0.22
Tnfsf11O35235 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Tnfsf11O35235 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfsf11O35235 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfsf11O35235 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfsf11O35235 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfsf11O35235 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfsf11O35235 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfsf11O35235 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tnfsf11O35235 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Tnfsf11O35235 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfsf11O35235 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tnfsf11O35235 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfsf11O35235 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfsf11O35235 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfsf11O35235 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.41■□□□□ 0.22
Tnfsf11O35235 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfsf11O35235 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfsf11O35235 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.41■□□□□ 0.22
Tnfsf11O35235 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfsf11O35235 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfsf11O35235 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.4■□□□□ 0.22
Tnfsf11O35235 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.4■□□□□ 0.22
Tnfsf11O35235 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
Tnfsf11O35235 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.4■□□□□ 0.22
Tnfsf11O35235 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfsf11O35235 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfsf11O35235 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Tnfsf11O35235 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfsf11O35235 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfsf11O35235 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.39■□□□□ 0.21
Tnfsf11O35235 Terc-201ENSMUST00000082862 423 ntBASIC16.39■□□□□ 0.21
Tnfsf11O35235 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfsf11O35235 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfsf11O35235 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfsf11O35235 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfsf11O35235 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfsf11O35235 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfsf11O35235 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.38■□□□□ 0.21
Tnfsf11O35235 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfsf11O35235 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Tnfsf11O35235 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.38■□□□□ 0.21
Tnfsf11O35235 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfsf11O35235 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.38■□□□□ 0.21
Tnfsf11O35235 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Tnfsf11O35235 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfsf11O35235 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfsf11O35235 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfsf11O35235 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Tnfsf11O35235 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Tnfsf11O35235 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfsf11O35235 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms