Protein–RNA interactions for Protein: O35126

Atn1, Atrophin-1, mousemouse

Predictions only

Length 1,175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atn1O35126 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.63■□□□□ 0.89
Atn1O35126 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atn1O35126 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atn1O35126 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atn1O35126 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atn1O35126 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Atn1O35126 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Atn1O35126 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atn1O35126 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.62■□□□□ 0.89
Atn1O35126 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Atn1O35126 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atn1O35126 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atn1O35126 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atn1O35126 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.61■□□□□ 0.89
Atn1O35126 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atn1O35126 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atn1O35126 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.6■□□□□ 0.89
Atn1O35126 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atn1O35126 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Atn1O35126 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atn1O35126 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atn1O35126 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atn1O35126 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.6■□□□□ 0.89
Atn1O35126 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Atn1O35126 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atn1O35126 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atn1O35126 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Atn1O35126 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atn1O35126 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atn1O35126 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atn1O35126 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atn1O35126 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atn1O35126 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atn1O35126 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atn1O35126 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atn1O35126 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atn1O35126 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atn1O35126 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atn1O35126 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atn1O35126 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Atn1O35126 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Atn1O35126 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Atn1O35126 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Atn1O35126 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atn1O35126 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Atn1O35126 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atn1O35126 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.57■□□□□ 0.88
Atn1O35126 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atn1O35126 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atn1O35126 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atn1O35126 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atn1O35126 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atn1O35126 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atn1O35126 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atn1O35126 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atn1O35126 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atn1O35126 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atn1O35126 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atn1O35126 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Atn1O35126 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Atn1O35126 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Atn1O35126 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atn1O35126 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atn1O35126 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Atn1O35126 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
Atn1O35126 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atn1O35126 Gm14523-201ENSMUST00000117260 558 ntBASIC20.54■□□□□ 0.88
Atn1O35126 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Atn1O35126 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Atn1O35126 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Atn1O35126 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.54■□□□□ 0.88
Atn1O35126 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Atn1O35126 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
Atn1O35126 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Atn1O35126 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Atn1O35126 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atn1O35126 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atn1O35126 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atn1O35126 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atn1O35126 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atn1O35126 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
Atn1O35126 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atn1O35126 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.53■□□□□ 0.88
Atn1O35126 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Atn1O35126 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.53■□□□□ 0.88
Atn1O35126 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atn1O35126 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atn1O35126 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Atn1O35126 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atn1O35126 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Atn1O35126 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atn1O35126 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atn1O35126 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.51■□□□□ 0.87
Atn1O35126 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atn1O35126 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.51■□□□□ 0.87
Atn1O35126 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atn1O35126 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atn1O35126 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atn1O35126 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atn1O35126 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms