Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Ebf3O08791 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ebf3O08791 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ebf3O08791 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ebf3O08791 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ebf3O08791 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ebf3O08791 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ebf3O08791 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ebf3O08791 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ebf3O08791 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.96■■□□□ 1.11
Ebf3O08791 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ebf3O08791 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ebf3O08791 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ebf3O08791 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.95■■□□□ 1.1
Ebf3O08791 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ebf3O08791 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ebf3O08791 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Ebf3O08791 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ebf3O08791 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ebf3O08791 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Ebf3O08791 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ebf3O08791 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ebf3O08791 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.94■■□□□ 1.1
Ebf3O08791 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ebf3O08791 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ebf3O08791 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ebf3O08791 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ebf3O08791 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.93■■□□□ 1.1
Ebf3O08791 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ebf3O08791 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ebf3O08791 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ebf3O08791 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ebf3O08791 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ebf3O08791 Gm21956-201ENSMUST00000179946 522 ntBASIC21.92■■□□□ 1.1
Ebf3O08791 Gm10399-202ENSMUST00000202768 748 ntBASIC21.92■■□□□ 1.1
Ebf3O08791 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ebf3O08791 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
Ebf3O08791 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ebf3O08791 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Ebf3O08791 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ebf3O08791 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ebf3O08791 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ebf3O08791 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ebf3O08791 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ebf3O08791 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.9■■□□□ 1.1
Ebf3O08791 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ebf3O08791 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ebf3O08791 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ebf3O08791 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ebf3O08791 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.89■■□□□ 1.09
Ebf3O08791 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ebf3O08791 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Ebf3O08791 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ebf3O08791 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ebf3O08791 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ebf3O08791 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ebf3O08791 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.88■■□□□ 1.09
Ebf3O08791 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ebf3O08791 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.88■■□□□ 1.09
Ebf3O08791 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ebf3O08791 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ebf3O08791 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ebf3O08791 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ebf3O08791 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ebf3O08791 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ebf3O08791 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ebf3O08791 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Ebf3O08791 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ebf3O08791 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ebf3O08791 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ebf3O08791 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ebf3O08791 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.87■■□□□ 1.09
Ebf3O08791 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ebf3O08791 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ebf3O08791 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
Ebf3O08791 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ebf3O08791 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Ebf3O08791 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ebf3O08791 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ebf3O08791 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ebf3O08791 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ebf3O08791 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ebf3O08791 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.85■■□□□ 1.09
Ebf3O08791 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.85■■□□□ 1.09
Ebf3O08791 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ebf3O08791 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ebf3O08791 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ebf3O08791 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ebf3O08791 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ebf3O08791 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ebf3O08791 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ebf3O08791 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ebf3O08791 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ebf3O08791 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.84■■□□□ 1.09
Ebf3O08791 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.84■■□□□ 1.09
Ebf3O08791 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ebf3O08791 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ebf3O08791 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
Ebf3O08791 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.84■■□□□ 1.09
Ebf3O08791 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.84■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms