Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Colca2F8VPY8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Colca2F8VPY8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Colca2F8VPY8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Colca2F8VPY8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.57■□□□□ 0.88
Colca2F8VPY8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Colca2F8VPY8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Colca2F8VPY8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Colca2F8VPY8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.57■□□□□ 0.88
Colca2F8VPY8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
Colca2F8VPY8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.57■□□□□ 0.88
Colca2F8VPY8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Colca2F8VPY8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Colca2F8VPY8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Colca2F8VPY8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Colca2F8VPY8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Colca2F8VPY8 Mir7075-201ENSMUST00000184187 82 ntBASIC20.56■□□□□ 0.88
Colca2F8VPY8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Colca2F8VPY8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Colca2F8VPY8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Colca2F8VPY8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Colca2F8VPY8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Colca2F8VPY8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Colca2F8VPY8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Colca2F8VPY8 Gm43017-201ENSMUST00000198296 752 ntBASIC20.55■□□□□ 0.88
Colca2F8VPY8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Colca2F8VPY8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Colca2F8VPY8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Colca2F8VPY8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Colca2F8VPY8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
Colca2F8VPY8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Colca2F8VPY8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Colca2F8VPY8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Colca2F8VPY8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Colca2F8VPY8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Colca2F8VPY8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Colca2F8VPY8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Colca2F8VPY8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Colca2F8VPY8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Colca2F8VPY8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.52■□□□□ 0.88
Colca2F8VPY8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Colca2F8VPY8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.52■□□□□ 0.88
Colca2F8VPY8 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.52■□□□□ 0.88
Colca2F8VPY8 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.52■□□□□ 0.88
Colca2F8VPY8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Colca2F8VPY8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Colca2F8VPY8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Colca2F8VPY8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Colca2F8VPY8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Colca2F8VPY8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Colca2F8VPY8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Colca2F8VPY8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Colca2F8VPY8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Colca2F8VPY8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Colca2F8VPY8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Colca2F8VPY8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Colca2F8VPY8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Colca2F8VPY8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Colca2F8VPY8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.5■□□□□ 0.87
Colca2F8VPY8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.5■□□□□ 0.87
Colca2F8VPY8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.5■□□□□ 0.87
Colca2F8VPY8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Colca2F8VPY8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Colca2F8VPY8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Colca2F8VPY8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.5■□□□□ 0.87
Colca2F8VPY8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Colca2F8VPY8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Colca2F8VPY8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Colca2F8VPY8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Colca2F8VPY8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Colca2F8VPY8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Colca2F8VPY8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Colca2F8VPY8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.49■□□□□ 0.87
Colca2F8VPY8 Gm29257-201ENSMUST00000186115 639 ntBASIC20.49■□□□□ 0.87
Colca2F8VPY8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Colca2F8VPY8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.49■□□□□ 0.87
Colca2F8VPY8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
Colca2F8VPY8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Colca2F8VPY8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.48■□□□□ 0.87
Colca2F8VPY8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Colca2F8VPY8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Colca2F8VPY8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Colca2F8VPY8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.47■□□□□ 0.87
Colca2F8VPY8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Colca2F8VPY8 Gm8493-201ENSMUST00000196881 489 ntBASIC20.47■□□□□ 0.87
Colca2F8VPY8 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.47■□□□□ 0.87
Colca2F8VPY8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Colca2F8VPY8 Gm5874-201ENSMUST00000096101 508 ntBASIC20.46■□□□□ 0.87
Colca2F8VPY8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.46■□□□□ 0.87
Colca2F8VPY8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Colca2F8VPY8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Colca2F8VPY8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Colca2F8VPY8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Colca2F8VPY8 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.45■□□□□ 0.86
Colca2F8VPY8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Colca2F8VPY8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Colca2F8VPY8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Colca2F8VPY8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Colca2F8VPY8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Colca2F8VPY8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms