Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.63■□□□□ 0.73
IsxA1A546 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
IsxA1A546 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IsxA1A546 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IsxA1A546 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
IsxA1A546 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IsxA1A546 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IsxA1A546 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
IsxA1A546 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
IsxA1A546 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IsxA1A546 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IsxA1A546 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
IsxA1A546 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
IsxA1A546 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IsxA1A546 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IsxA1A546 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
IsxA1A546 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.61■□□□□ 0.73
IsxA1A546 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
IsxA1A546 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IsxA1A546 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IsxA1A546 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
IsxA1A546 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
IsxA1A546 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IsxA1A546 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IsxA1A546 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.59■□□□□ 0.73
IsxA1A546 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IsxA1A546 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IsxA1A546 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IsxA1A546 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IsxA1A546 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
IsxA1A546 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
IsxA1A546 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.58■□□□□ 0.73
IsxA1A546 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
IsxA1A546 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.57■□□□□ 0.72
IsxA1A546 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IsxA1A546 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IsxA1A546 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IsxA1A546 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IsxA1A546 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
IsxA1A546 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
IsxA1A546 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IsxA1A546 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IsxA1A546 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IsxA1A546 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
IsxA1A546 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.55■□□□□ 0.72
IsxA1A546 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
IsxA1A546 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IsxA1A546 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
IsxA1A546 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
IsxA1A546 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
IsxA1A546 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.54■□□□□ 0.72
IsxA1A546 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
IsxA1A546 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.54■□□□□ 0.72
IsxA1A546 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
IsxA1A546 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IsxA1A546 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
IsxA1A546 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IsxA1A546 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.53■□□□□ 0.72
IsxA1A546 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.53■□□□□ 0.72
IsxA1A546 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
IsxA1A546 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
IsxA1A546 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
IsxA1A546 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IsxA1A546 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IsxA1A546 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IsxA1A546 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.53■□□□□ 0.72
IsxA1A546 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.53■□□□□ 0.72
IsxA1A546 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
IsxA1A546 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IsxA1A546 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
IsxA1A546 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
IsxA1A546 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
IsxA1A546 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
IsxA1A546 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.52■□□□□ 0.71
IsxA1A546 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IsxA1A546 Gm11599-201ENSMUST00000118720 878 ntBASIC19.51■□□□□ 0.71
IsxA1A546 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.51■□□□□ 0.71
IsxA1A546 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IsxA1A546 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
IsxA1A546 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
IsxA1A546 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.51■□□□□ 0.71
IsxA1A546 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
IsxA1A546 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
IsxA1A546 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IsxA1A546 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
IsxA1A546 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
IsxA1A546 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.5■□□□□ 0.71
IsxA1A546 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
IsxA1A546 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
IsxA1A546 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
IsxA1A546 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IsxA1A546 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
IsxA1A546 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IsxA1A546 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IsxA1A546 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IsxA1A546 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IsxA1A546 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
IsxA1A546 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
IsxA1A546 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
IsxA1A546 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms