Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC15.48■□□□□ 0.07
Trdv2-1A0A0G2JGB9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trdv2-1A0A0G2JGB9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.48■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trdv2-1A0A0G2JGB9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trdv2-1A0A0G2JGB9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trdv2-1A0A0G2JGB9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Golph3-202ENSMUST00000226517 2359 ntBASIC15.43■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.43■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC15.42■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
Trdv2-1A0A0G2JGB9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.4■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Trdv2-1A0A0G2JGB9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trdv2-1A0A0G2JGB9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.39■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.39■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.38■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trdv2-1A0A0G2JGB9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC15.37■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trdv2-1A0A0G2JGB9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trdv2-1A0A0G2JGB9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC15.36■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms