Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13n-4A0A0G2JG01 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.04■□□□□ 0.32
Trav13n-4A0A0G2JG01 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav13n-4A0A0G2JG01 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13n-4A0A0G2JG01 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Trav13n-4A0A0G2JG01 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav13n-4A0A0G2JG01 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13n-4A0A0G2JG01 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13n-4A0A0G2JG01 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13n-4A0A0G2JG01 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13n-4A0A0G2JG01 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.04■□□□□ 0.32
Trav13n-4A0A0G2JG01 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav13n-4A0A0G2JG01 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13n-4A0A0G2JG01 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13n-4A0A0G2JG01 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13n-4A0A0G2JG01 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13n-4A0A0G2JG01 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.03■□□□□ 0.32
Trav13n-4A0A0G2JG01 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13n-4A0A0G2JG01 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav13n-4A0A0G2JG01 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trav13n-4A0A0G2JG01 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trav13n-4A0A0G2JG01 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav13n-4A0A0G2JG01 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav13n-4A0A0G2JG01 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trav13n-4A0A0G2JG01 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.02■□□□□ 0.32
Trav13n-4A0A0G2JG01 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav13n-4A0A0G2JG01 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav13n-4A0A0G2JG01 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav13n-4A0A0G2JG01 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Trav13n-4A0A0G2JG01 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.01■□□□□ 0.31
Trav13n-4A0A0G2JG01 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13n-4A0A0G2JG01 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trav13n-4A0A0G2JG01 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13n-4A0A0G2JG01 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav13n-4A0A0G2JG01 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13n-4A0A0G2JG01 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13n-4A0A0G2JG01 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13n-4A0A0G2JG01 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trav13n-4A0A0G2JG01 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav13n-4A0A0G2JG01 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17■□□□□ 0.31
Trav13n-4A0A0G2JG01 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trav13n-4A0A0G2JG01 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav13n-4A0A0G2JG01 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav13n-4A0A0G2JG01 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17■□□□□ 0.31
Trav13n-4A0A0G2JG01 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav13n-4A0A0G2JG01 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav13n-4A0A0G2JG01 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav13n-4A0A0G2JG01 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav13n-4A0A0G2JG01 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav13n-4A0A0G2JG01 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav13n-4A0A0G2JG01 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav13n-4A0A0G2JG01 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav13n-4A0A0G2JG01 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13n-4A0A0G2JG01 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13n-4A0A0G2JG01 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trav13n-4A0A0G2JG01 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13n-4A0A0G2JG01 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav13n-4A0A0G2JG01 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav13n-4A0A0G2JG01 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.99■□□□□ 0.31
Trav13n-4A0A0G2JG01 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13n-4A0A0G2JG01 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13n-4A0A0G2JG01 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13n-4A0A0G2JG01 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Trav13n-4A0A0G2JG01 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13n-4A0A0G2JG01 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13n-4A0A0G2JG01 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13n-4A0A0G2JG01 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13n-4A0A0G2JG01 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13n-4A0A0G2JG01 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13n-4A0A0G2JG01 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.98■□□□□ 0.31
Trav13n-4A0A0G2JG01 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13n-4A0A0G2JG01 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13n-4A0A0G2JG01 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13n-4A0A0G2JG01 Gm14117-201ENSMUST00000122417 843 ntBASIC16.98■□□□□ 0.31
Trav13n-4A0A0G2JG01 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13n-4A0A0G2JG01 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13n-4A0A0G2JG01 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13n-4A0A0G2JG01 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13n-4A0A0G2JG01 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trav13n-4A0A0G2JG01 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13n-4A0A0G2JG01 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13n-4A0A0G2JG01 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13n-4A0A0G2JG01 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav13n-4A0A0G2JG01 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trav13n-4A0A0G2JG01 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13n-4A0A0G2JG01 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13n-4A0A0G2JG01 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.97■□□□□ 0.31
Trav13n-4A0A0G2JG01 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13n-4A0A0G2JG01 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trav13n-4A0A0G2JG01 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13n-4A0A0G2JG01 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13n-4A0A0G2JG01 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13n-4A0A0G2JG01 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13n-4A0A0G2JG01 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13n-4A0A0G2JG01 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13n-4A0A0G2JG01 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13n-4A0A0G2JG01 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trav13n-4A0A0G2JG01 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13n-4A0A0G2JG01 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13n-4A0A0G2JG01 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms