Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Gm22567-201ENSMUST00000175542 342 ntBASIC15.25■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.23■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-1A0A0G2JEU8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav13n-1A0A0G2JEU8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13n-1A0A0G2JEU8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.21■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.21■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13n-1A0A0G2JEU8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Trav13n-1A0A0G2JEU8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trav13n-1A0A0G2JEU8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-1A0A0G2JEU8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav13n-1A0A0G2JEU8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-1A0A0G2JEU8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav13n-1A0A0G2JEU8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.17■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.16■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Gm14117-201ENSMUST00000122417 843 ntBASIC15.16■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-1A0A0G2JEU8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 173.1 ms