Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
BC053393A0A0B4J1F6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
BC053393A0A0B4J1F6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BC053393A0A0B4J1F6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
BC053393A0A0B4J1F6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BC053393A0A0B4J1F6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BC053393A0A0B4J1F6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.85■□□□□ 0.29
BC053393A0A0B4J1F6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.85■□□□□ 0.29
BC053393A0A0B4J1F6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
BC053393A0A0B4J1F6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BC053393A0A0B4J1F6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BC053393A0A0B4J1F6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BC053393A0A0B4J1F6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
BC053393A0A0B4J1F6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BC053393A0A0B4J1F6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BC053393A0A0B4J1F6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BC053393A0A0B4J1F6 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.85■□□□□ 0.29
BC053393A0A0B4J1F6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BC053393A0A0B4J1F6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.84■□□□□ 0.29
BC053393A0A0B4J1F6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BC053393A0A0B4J1F6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BC053393A0A0B4J1F6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BC053393A0A0B4J1F6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.84■□□□□ 0.29
BC053393A0A0B4J1F6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.84■□□□□ 0.29
BC053393A0A0B4J1F6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BC053393A0A0B4J1F6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
BC053393A0A0B4J1F6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BC053393A0A0B4J1F6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.84■□□□□ 0.29
BC053393A0A0B4J1F6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
BC053393A0A0B4J1F6 Gm11687-201ENSMUST00000118911 886 ntBASIC16.83■□□□□ 0.28
BC053393A0A0B4J1F6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BC053393A0A0B4J1F6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BC053393A0A0B4J1F6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BC053393A0A0B4J1F6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BC053393A0A0B4J1F6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BC053393A0A0B4J1F6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BC053393A0A0B4J1F6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.82■□□□□ 0.28
BC053393A0A0B4J1F6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BC053393A0A0B4J1F6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.82■□□□□ 0.28
BC053393A0A0B4J1F6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BC053393A0A0B4J1F6 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.82■□□□□ 0.28
BC053393A0A0B4J1F6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BC053393A0A0B4J1F6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BC053393A0A0B4J1F6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BC053393A0A0B4J1F6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BC053393A0A0B4J1F6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BC053393A0A0B4J1F6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BC053393A0A0B4J1F6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BC053393A0A0B4J1F6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
BC053393A0A0B4J1F6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BC053393A0A0B4J1F6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BC053393A0A0B4J1F6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC053393A0A0B4J1F6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC053393A0A0B4J1F6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC053393A0A0B4J1F6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC053393A0A0B4J1F6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC053393A0A0B4J1F6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC053393A0A0B4J1F6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC053393A0A0B4J1F6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
BC053393A0A0B4J1F6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BC053393A0A0B4J1F6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
BC053393A0A0B4J1F6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
BC053393A0A0B4J1F6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
BC053393A0A0B4J1F6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC053393A0A0B4J1F6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC053393A0A0B4J1F6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BC053393A0A0B4J1F6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC053393A0A0B4J1F6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BC053393A0A0B4J1F6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.79■□□□□ 0.28
BC053393A0A0B4J1F6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC053393A0A0B4J1F6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC053393A0A0B4J1F6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
BC053393A0A0B4J1F6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC053393A0A0B4J1F6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC053393A0A0B4J1F6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BC053393A0A0B4J1F6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC053393A0A0B4J1F6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC053393A0A0B4J1F6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC053393A0A0B4J1F6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
BC053393A0A0B4J1F6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC053393A0A0B4J1F6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BC053393A0A0B4J1F6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BC053393A0A0B4J1F6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.78■□□□□ 0.28
BC053393A0A0B4J1F6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BC053393A0A0B4J1F6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BC053393A0A0B4J1F6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BC053393A0A0B4J1F6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BC053393A0A0B4J1F6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BC053393A0A0B4J1F6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BC053393A0A0B4J1F6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.77■□□□□ 0.28
BC053393A0A0B4J1F6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BC053393A0A0B4J1F6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
BC053393A0A0B4J1F6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BC053393A0A0B4J1F6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
BC053393A0A0B4J1F6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BC053393A0A0B4J1F6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BC053393A0A0B4J1F6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
BC053393A0A0B4J1F6 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.76■□□□□ 0.27
BC053393A0A0B4J1F6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BC053393A0A0B4J1F6 Gm44428-201ENSMUST00000204474 874 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms