Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdv1A0A075B657 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trdv1A0A075B657 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdv1A0A075B657 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdv1A0A075B657 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.1■□□□□ 0.17
Trdv1A0A075B657 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdv1A0A075B657 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdv1A0A075B657 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdv1A0A075B657 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Trdv1A0A075B657 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdv1A0A075B657 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.1■□□□□ 0.17
Trdv1A0A075B657 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdv1A0A075B657 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trdv1A0A075B657 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trdv1A0A075B657 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.09■□□□□ 0.17
Trdv1A0A075B657 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdv1A0A075B657 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdv1A0A075B657 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdv1A0A075B657 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdv1A0A075B657 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdv1A0A075B657 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trdv1A0A075B657 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.09■□□□□ 0.17
Trdv1A0A075B657 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdv1A0A075B657 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdv1A0A075B657 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdv1A0A075B657 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trdv1A0A075B657 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trdv1A0A075B657 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trdv1A0A075B657 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.08■□□□□ 0.17
Trdv1A0A075B657 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trdv1A0A075B657 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trdv1A0A075B657 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trdv1A0A075B657 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trdv1A0A075B657 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trdv1A0A075B657 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trdv1A0A075B657 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trdv1A0A075B657 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Trdv1A0A075B657 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trdv1A0A075B657 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trdv1A0A075B657 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trdv1A0A075B657 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trdv1A0A075B657 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trdv1A0A075B657 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trdv1A0A075B657 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trdv1A0A075B657 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trdv1A0A075B657 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trdv1A0A075B657 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.06■□□□□ 0.16
Trdv1A0A075B657 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trdv1A0A075B657 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trdv1A0A075B657 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trdv1A0A075B657 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Trdv1A0A075B657 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trdv1A0A075B657 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
Trdv1A0A075B657 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trdv1A0A075B657 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trdv1A0A075B657 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trdv1A0A075B657 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trdv1A0A075B657 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trdv1A0A075B657 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Trdv1A0A075B657 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trdv1A0A075B657 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.05■□□□□ 0.16
Trdv1A0A075B657 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.05■□□□□ 0.16
Trdv1A0A075B657 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trdv1A0A075B657 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trdv1A0A075B657 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trdv1A0A075B657 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Trdv1A0A075B657 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trdv1A0A075B657 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdv1A0A075B657 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdv1A0A075B657 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.04■□□□□ 0.16
Trdv1A0A075B657 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.04■□□□□ 0.16
Trdv1A0A075B657 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdv1A0A075B657 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdv1A0A075B657 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdv1A0A075B657 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdv1A0A075B657 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trdv1A0A075B657 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trdv1A0A075B657 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdv1A0A075B657 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdv1A0A075B657 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdv1A0A075B657 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trdv1A0A075B657 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdv1A0A075B657 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trdv1A0A075B657 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
Trdv1A0A075B657 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.02■□□□□ 0.16
Trdv1A0A075B657 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trdv1A0A075B657 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trdv1A0A075B657 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trdv1A0A075B657 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trdv1A0A075B657 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trdv1A0A075B657 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trdv1A0A075B657 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trdv1A0A075B657 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.01■□□□□ 0.15
Trdv1A0A075B657 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trdv1A0A075B657 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.01■□□□□ 0.15
Trdv1A0A075B657 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trdv1A0A075B657 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.01■□□□□ 0.15
Trdv1A0A075B657 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trdv1A0A075B657 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trdv1A0A075B657 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms