Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav18A0A075B656 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.31■□□□□ 0.36
Trav18A0A075B656 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav18A0A075B656 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav18A0A075B656 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav18A0A075B656 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav18A0A075B656 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trav18A0A075B656 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav18A0A075B656 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Trav18A0A075B656 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav18A0A075B656 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav18A0A075B656 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trav18A0A075B656 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav18A0A075B656 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trav18A0A075B656 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.29■□□□□ 0.36
Trav18A0A075B656 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav18A0A075B656 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Trav18A0A075B656 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav18A0A075B656 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav18A0A075B656 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav18A0A075B656 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.29■□□□□ 0.36
Trav18A0A075B656 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trav18A0A075B656 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav18A0A075B656 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav18A0A075B656 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav18A0A075B656 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav18A0A075B656 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav18A0A075B656 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav18A0A075B656 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav18A0A075B656 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav18A0A075B656 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trav18A0A075B656 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trav18A0A075B656 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.27■□□□□ 0.36
Trav18A0A075B656 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav18A0A075B656 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.27■□□□□ 0.36
Trav18A0A075B656 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav18A0A075B656 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trav18A0A075B656 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav18A0A075B656 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Trav18A0A075B656 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav18A0A075B656 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav18A0A075B656 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav18A0A075B656 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav18A0A075B656 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav18A0A075B656 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trav18A0A075B656 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav18A0A075B656 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav18A0A075B656 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav18A0A075B656 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trav18A0A075B656 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav18A0A075B656 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav18A0A075B656 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav18A0A075B656 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav18A0A075B656 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav18A0A075B656 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Trav18A0A075B656 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav18A0A075B656 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav18A0A075B656 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav18A0A075B656 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav18A0A075B656 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav18A0A075B656 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav18A0A075B656 Gm11175-201ENSMUST00000116172 543 ntBASIC17.25■□□□□ 0.35
Trav18A0A075B656 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav18A0A075B656 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav18A0A075B656 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trav18A0A075B656 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav18A0A075B656 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav18A0A075B656 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav18A0A075B656 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav18A0A075B656 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trav18A0A075B656 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav18A0A075B656 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav18A0A075B656 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav18A0A075B656 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trav18A0A075B656 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trav18A0A075B656 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav18A0A075B656 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav18A0A075B656 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav18A0A075B656 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Trav18A0A075B656 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav18A0A075B656 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav18A0A075B656 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.23■□□□□ 0.35
Trav18A0A075B656 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav18A0A075B656 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav18A0A075B656 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav18A0A075B656 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.22■□□□□ 0.35
Trav18A0A075B656 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trav18A0A075B656 Gm14523-201ENSMUST00000117260 558 ntBASIC17.22■□□□□ 0.35
Trav18A0A075B656 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav18A0A075B656 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.22■□□□□ 0.35
Trav18A0A075B656 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.22■□□□□ 0.35
Trav18A0A075B656 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav18A0A075B656 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav18A0A075B656 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav18A0A075B656 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav18A0A075B656 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav18A0A075B656 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav18A0A075B656 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav18A0A075B656 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav18A0A075B656 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms