Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5-4A0A075B652 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5-4A0A075B652 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5-4A0A075B652 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav5-4A0A075B652 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav5-4A0A075B652 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav5-4A0A075B652 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav5-4A0A075B652 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav5-4A0A075B652 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav5-4A0A075B652 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav5-4A0A075B652 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav5-4A0A075B652 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav5-4A0A075B652 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trav5-4A0A075B652 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav5-4A0A075B652 Gm7332-201ENSMUST00000118351 454 ntBASIC17.58■□□□□ 0.4
Trav5-4A0A075B652 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav5-4A0A075B652 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav5-4A0A075B652 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav5-4A0A075B652 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav5-4A0A075B652 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav5-4A0A075B652 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav5-4A0A075B652 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5-4A0A075B652 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5-4A0A075B652 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trav5-4A0A075B652 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.57■□□□□ 0.4
Trav5-4A0A075B652 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5-4A0A075B652 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5-4A0A075B652 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.57■□□□□ 0.4
Trav5-4A0A075B652 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5-4A0A075B652 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5-4A0A075B652 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5-4A0A075B652 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5-4A0A075B652 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5-4A0A075B652 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5-4A0A075B652 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5-4A0A075B652 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav5-4A0A075B652 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.56■□□□□ 0.4
Trav5-4A0A075B652 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.56■□□□□ 0.4
Trav5-4A0A075B652 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav5-4A0A075B652 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav5-4A0A075B652 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trav5-4A0A075B652 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav5-4A0A075B652 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav5-4A0A075B652 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav5-4A0A075B652 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trav5-4A0A075B652 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav5-4A0A075B652 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5-4A0A075B652 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5-4A0A075B652 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5-4A0A075B652 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5-4A0A075B652 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.54■□□□□ 0.4
Trav5-4A0A075B652 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5-4A0A075B652 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Trav5-4A0A075B652 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5-4A0A075B652 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5-4A0A075B652 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trav5-4A0A075B652 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5-4A0A075B652 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5-4A0A075B652 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trav5-4A0A075B652 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav5-4A0A075B652 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5-4A0A075B652 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav5-4A0A075B652 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav5-4A0A075B652 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav5-4A0A075B652 Mir6538-201ENSMUST00000183713 110 ntBASIC17.53■□□□□ 0.4
Trav5-4A0A075B652 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav5-4A0A075B652 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trav5-4A0A075B652 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.53■□□□□ 0.4
Trav5-4A0A075B652 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav5-4A0A075B652 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav5-4A0A075B652 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav5-4A0A075B652 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav5-4A0A075B652 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav5-4A0A075B652 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav5-4A0A075B652 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trav5-4A0A075B652 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.52■□□□□ 0.39
Trav5-4A0A075B652 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Trav5-4A0A075B652 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav5-4A0A075B652 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav5-4A0A075B652 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav5-4A0A075B652 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav5-4A0A075B652 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav5-4A0A075B652 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav5-4A0A075B652 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav5-4A0A075B652 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav5-4A0A075B652 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
Trav5-4A0A075B652 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav5-4A0A075B652 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav5-4A0A075B652 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trav5-4A0A075B652 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav5-4A0A075B652 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.5■□□□□ 0.39
Trav5-4A0A075B652 Gm12366-201ENSMUST00000121722 873 ntBASIC17.5■□□□□ 0.39
Trav5-4A0A075B652 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.5■□□□□ 0.39
Trav5-4A0A075B652 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.5■□□□□ 0.39
Trav5-4A0A075B652 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.5■□□□□ 0.39
Trav5-4A0A075B652 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav5-4A0A075B652 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trav5-4A0A075B652 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav5-4A0A075B652 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trav5-4A0A075B652 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms