Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.29■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Gm44428-201ENSMUST00000204474 874 ntBASIC17.28■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav15-2-dv6-2A0A075B650 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.26■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.26■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.25■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.23■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.23■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.22■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.21■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.21■□□□□ 0.35
Trav15-2-dv6-2A0A075B650 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.19■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.18■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms