Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav8-1A0A075B641 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav8-1A0A075B641 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8-1A0A075B641 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8-1A0A075B641 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8-1A0A075B641 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Trav8-1A0A075B641 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8-1A0A075B641 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8-1A0A075B641 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC15.09■□□□□ 0.01
Trav8-1A0A075B641 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8-1A0A075B641 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8-1A0A075B641 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Trav8-1A0A075B641 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8-1A0A075B641 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8-1A0A075B641 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav8-1A0A075B641 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav8-1A0A075B641 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav8-1A0A075B641 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav8-1A0A075B641 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
Trav8-1A0A075B641 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav8-1A0A075B641 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav8-1A0A075B641 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8-1A0A075B641 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8-1A0A075B641 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8-1A0A075B641 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8-1A0A075B641 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav8-1A0A075B641 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav8-1A0A075B641 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.06■□□□□ 0
Trav8-1A0A075B641 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8-1A0A075B641 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8-1A0A075B641 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8-1A0A075B641 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8-1A0A075B641 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.06■□□□□ 0
Trav8-1A0A075B641 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav8-1A0A075B641 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trav8-1A0A075B641 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trav8-1A0A075B641 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Trav8-1A0A075B641 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8-1A0A075B641 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.05■□□□□ -0
Trav8-1A0A075B641 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav8-1A0A075B641 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav8-1A0A075B641 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8-1A0A075B641 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.04■□□□□ -0
Trav8-1A0A075B641 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8-1A0A075B641 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8-1A0A075B641 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8-1A0A075B641 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Trav8-1A0A075B641 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8-1A0A075B641 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8-1A0A075B641 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8-1A0A075B641 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.03■□□□□ -0
Trav8-1A0A075B641 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8-1A0A075B641 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8-1A0A075B641 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8-1A0A075B641 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC15.03■□□□□ -0
Trav8-1A0A075B641 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.03■□□□□ -0
Trav8-1A0A075B641 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8-1A0A075B641 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8-1A0A075B641 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav8-1A0A075B641 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8-1A0A075B641 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8-1A0A075B641 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8-1A0A075B641 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8-1A0A075B641 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC15.02■□□□□ -0
Trav8-1A0A075B641 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8-1A0A075B641 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav8-1A0A075B641 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8-1A0A075B641 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8-1A0A075B641 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8-1A0A075B641 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8-1A0A075B641 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8-1A0A075B641 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8-1A0A075B641 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8-1A0A075B641 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.02□□□□□ -0.01
Trav8-1A0A075B641 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8-1A0A075B641 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Trav8-1A0A075B641 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8-1A0A075B641 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8-1A0A075B641 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8-1A0A075B641 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Trav8-1A0A075B641 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8-1A0A075B641 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8-1A0A075B641 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8-1A0A075B641 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8-1A0A075B641 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav8-1A0A075B641 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
Trav8-1A0A075B641 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8-1A0A075B641 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8-1A0A075B641 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav8-1A0A075B641 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8-1A0A075B641 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8-1A0A075B641 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav8-1A0A075B641 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8-1A0A075B641 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8-1A0A075B641 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8-1A0A075B641 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8-1A0A075B641 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8-1A0A075B641 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8-1A0A075B641 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8-1A0A075B641 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms