Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6-7-dv9A0A075B639 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6-7-dv9A0A075B639 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6-7-dv9A0A075B639 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.81■□□□□ 0.6
Trav6-7-dv9A0A075B639 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6-7-dv9A0A075B639 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6-7-dv9A0A075B639 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6-7-dv9A0A075B639 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6-7-dv9A0A075B639 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trav6-7-dv9A0A075B639 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trav6-7-dv9A0A075B639 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6-7-dv9A0A075B639 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Trav6-7-dv9A0A075B639 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6-7-dv9A0A075B639 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trav6-7-dv9A0A075B639 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6-7-dv9A0A075B639 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.79■□□□□ 0.6
Trav6-7-dv9A0A075B639 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6-7-dv9A0A075B639 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.79■□□□□ 0.6
Trav6-7-dv9A0A075B639 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6-7-dv9A0A075B639 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trav6-7-dv9A0A075B639 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Trav6-7-dv9A0A075B639 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6-7-dv9A0A075B639 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6-7-dv9A0A075B639 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6-7-dv9A0A075B639 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6-7-dv9A0A075B639 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6-7-dv9A0A075B639 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6-7-dv9A0A075B639 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6-7-dv9A0A075B639 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trav6-7-dv9A0A075B639 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav6-7-dv9A0A075B639 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav6-7-dv9A0A075B639 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav6-7-dv9A0A075B639 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.77■□□□□ 0.6
Trav6-7-dv9A0A075B639 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trav6-7-dv9A0A075B639 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav6-7-dv9A0A075B639 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav6-7-dv9A0A075B639 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav6-7-dv9A0A075B639 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav6-7-dv9A0A075B639 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trav6-7-dv9A0A075B639 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav6-7-dv9A0A075B639 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav6-7-dv9A0A075B639 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav6-7-dv9A0A075B639 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav6-7-dv9A0A075B639 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Trav6-7-dv9A0A075B639 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Trav6-7-dv9A0A075B639 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav6-7-dv9A0A075B639 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav6-7-dv9A0A075B639 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Trav6-7-dv9A0A075B639 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav6-7-dv9A0A075B639 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.75■□□□□ 0.59
Trav6-7-dv9A0A075B639 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trav6-7-dv9A0A075B639 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav6-7-dv9A0A075B639 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav6-7-dv9A0A075B639 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav6-7-dv9A0A075B639 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.74■□□□□ 0.59
Trav6-7-dv9A0A075B639 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trav6-7-dv9A0A075B639 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6-7-dv9A0A075B639 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6-7-dv9A0A075B639 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Trav6-7-dv9A0A075B639 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
Trav6-7-dv9A0A075B639 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6-7-dv9A0A075B639 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6-7-dv9A0A075B639 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.73■□□□□ 0.59
Trav6-7-dv9A0A075B639 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6-7-dv9A0A075B639 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6-7-dv9A0A075B639 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6-7-dv9A0A075B639 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trav6-7-dv9A0A075B639 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6-7-dv9A0A075B639 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6-7-dv9A0A075B639 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6-7-dv9A0A075B639 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6-7-dv9A0A075B639 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6-7-dv9A0A075B639 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6-7-dv9A0A075B639 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav6-7-dv9A0A075B639 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Trav6-7-dv9A0A075B639 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav6-7-dv9A0A075B639 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav6-7-dv9A0A075B639 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.71■□□□□ 0.59
Trav6-7-dv9A0A075B639 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.71■□□□□ 0.59
Trav6-7-dv9A0A075B639 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.71■□□□□ 0.59
Trav6-7-dv9A0A075B639 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav6-7-dv9A0A075B639 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav6-7-dv9A0A075B639 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav6-7-dv9A0A075B639 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trav6-7-dv9A0A075B639 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav6-7-dv9A0A075B639 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav6-7-dv9A0A075B639 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav6-7-dv9A0A075B639 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Trav6-7-dv9A0A075B639 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav6-7-dv9A0A075B639 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.69■□□□□ 0.58
Trav6-7-dv9A0A075B639 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6-7-dv9A0A075B639 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Trav6-7-dv9A0A075B639 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6-7-dv9A0A075B639 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Trav6-7-dv9A0A075B639 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6-7-dv9A0A075B639 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6-7-dv9A0A075B639 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6-7-dv9A0A075B639 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6-7-dv9A0A075B639 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6-7-dv9A0A075B639 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms