Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav1A0A075B5Z4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav1A0A075B5Z4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.76■□□□□ 0.75
Trav1A0A075B5Z4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav1A0A075B5Z4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav1A0A075B5Z4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav1A0A075B5Z4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Trav1A0A075B5Z4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav1A0A075B5Z4 Gm10420-201ENSMUST00000121713 882 ntBASIC19.75■□□□□ 0.75
Trav1A0A075B5Z4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav1A0A075B5Z4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav1A0A075B5Z4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.75■□□□□ 0.75
Trav1A0A075B5Z4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav1A0A075B5Z4 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.75■□□□□ 0.75
Trav1A0A075B5Z4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav1A0A075B5Z4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.75■□□□□ 0.75
Trav1A0A075B5Z4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.74■□□□□ 0.75
Trav1A0A075B5Z4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav1A0A075B5Z4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trav1A0A075B5Z4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav1A0A075B5Z4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trav1A0A075B5Z4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav1A0A075B5Z4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav1A0A075B5Z4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav1A0A075B5Z4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav1A0A075B5Z4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trav1A0A075B5Z4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav1A0A075B5Z4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav1A0A075B5Z4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav1A0A075B5Z4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
Trav1A0A075B5Z4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav1A0A075B5Z4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trav1A0A075B5Z4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.73■□□□□ 0.75
Trav1A0A075B5Z4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav1A0A075B5Z4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trav1A0A075B5Z4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav1A0A075B5Z4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trav1A0A075B5Z4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav1A0A075B5Z4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav1A0A075B5Z4 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.71■□□□□ 0.75
Trav1A0A075B5Z4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trav1A0A075B5Z4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav1A0A075B5Z4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav1A0A075B5Z4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav1A0A075B5Z4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav1A0A075B5Z4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav1A0A075B5Z4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav1A0A075B5Z4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav1A0A075B5Z4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Trav1A0A075B5Z4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav1A0A075B5Z4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav1A0A075B5Z4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trav1A0A075B5Z4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav1A0A075B5Z4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trav1A0A075B5Z4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav1A0A075B5Z4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav1A0A075B5Z4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav1A0A075B5Z4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav1A0A075B5Z4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav1A0A075B5Z4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
Trav1A0A075B5Z4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav1A0A075B5Z4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav1A0A075B5Z4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.68■□□□□ 0.74
Trav1A0A075B5Z4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav1A0A075B5Z4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.68■□□□□ 0.74
Trav1A0A075B5Z4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.68■□□□□ 0.74
Trav1A0A075B5Z4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav1A0A075B5Z4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.68■□□□□ 0.74
Trav1A0A075B5Z4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav1A0A075B5Z4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trav1A0A075B5Z4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.68■□□□□ 0.74
Trav1A0A075B5Z4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav1A0A075B5Z4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav1A0A075B5Z4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav1A0A075B5Z4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trav1A0A075B5Z4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.67■□□□□ 0.74
Trav1A0A075B5Z4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav1A0A075B5Z4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav1A0A075B5Z4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav1A0A075B5Z4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Trav1A0A075B5Z4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.66■□□□□ 0.74
Trav1A0A075B5Z4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav1A0A075B5Z4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav1A0A075B5Z4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Trav1A0A075B5Z4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trav1A0A075B5Z4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trav1A0A075B5Z4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav1A0A075B5Z4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav1A0A075B5Z4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav1A0A075B5Z4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav1A0A075B5Z4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav1A0A075B5Z4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.65■□□□□ 0.74
Trav1A0A075B5Z4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trav1A0A075B5Z4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav1A0A075B5Z4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav1A0A075B5Z4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trav1A0A075B5Z4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trav1A0A075B5Z4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Trav1A0A075B5Z4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trav1A0A075B5Z4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms