Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CcsQ9WU84 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CcsQ9WU84 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CcsQ9WU84 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CcsQ9WU84 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CcsQ9WU84 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.65■□□□□ 0.9
CcsQ9WU84 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CcsQ9WU84 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CcsQ9WU84 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CcsQ9WU84 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CcsQ9WU84 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.6■□□□□ 0.89
CcsQ9WU84 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CcsQ9WU84 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CcsQ9WU84 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CcsQ9WU84 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CcsQ9WU84 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CcsQ9WU84 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CcsQ9WU84 Gm27325-201ENSMUST00000175467 74 ntBASIC20.55■□□□□ 0.88
CcsQ9WU84 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CcsQ9WU84 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CcsQ9WU84 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.5■□□□□ 0.87
CcsQ9WU84 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CcsQ9WU84 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.47■□□□□ 0.87
CcsQ9WU84 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CcsQ9WU84 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CcsQ9WU84 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CcsQ9WU84 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CcsQ9WU84 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CcsQ9WU84 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CcsQ9WU84 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CcsQ9WU84 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CcsQ9WU84 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CcsQ9WU84 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.34■□□□□ 0.85
CcsQ9WU84 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.32■□□□□ 0.84
CcsQ9WU84 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CcsQ9WU84 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CcsQ9WU84 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CcsQ9WU84 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CcsQ9WU84 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CcsQ9WU84 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.27■□□□□ 0.84
CcsQ9WU84 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CcsQ9WU84 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CcsQ9WU84 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CcsQ9WU84 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CcsQ9WU84 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CcsQ9WU84 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CcsQ9WU84 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.15■□□□□ 0.82
CcsQ9WU84 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
CcsQ9WU84 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CcsQ9WU84 Rab21-202ENSMUST00000218831 843 ntBASIC20.13■□□□□ 0.81
CcsQ9WU84 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CcsQ9WU84 Gm25262-201ENSMUST00000174934 133 ntBASIC20.11■□□□□ 0.81
CcsQ9WU84 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CcsQ9WU84 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CcsQ9WU84 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CcsQ9WU84 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.06■□□□□ 0.8
CcsQ9WU84 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CcsQ9WU84 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.05■□□□□ 0.8
CcsQ9WU84 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CcsQ9WU84 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CcsQ9WU84 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CcsQ9WU84 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CcsQ9WU84 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CcsQ9WU84 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CcsQ9WU84 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CcsQ9WU84 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.98■□□□□ 0.79
CcsQ9WU84 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CcsQ9WU84 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CcsQ9WU84 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CcsQ9WU84 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CcsQ9WU84 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CcsQ9WU84 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CcsQ9WU84 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CcsQ9WU84 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CcsQ9WU84 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CcsQ9WU84 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CcsQ9WU84 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CcsQ9WU84 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CcsQ9WU84 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CcsQ9WU84 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.84■□□□□ 0.77
CcsQ9WU84 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CcsQ9WU84 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CcsQ9WU84 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CcsQ9WU84 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CcsQ9WU84 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.82■□□□□ 0.76
CcsQ9WU84 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.82■□□□□ 0.76
CcsQ9WU84 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CcsQ9WU84 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CcsQ9WU84 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CcsQ9WU84 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CcsQ9WU84 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CcsQ9WU84 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CcsQ9WU84 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.78■□□□□ 0.76
CcsQ9WU84 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CcsQ9WU84 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
CcsQ9WU84 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.77■□□□□ 0.76
CcsQ9WU84 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CcsQ9WU84 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CcsQ9WU84 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
CcsQ9WU84 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms