Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Nup88Q8CEC0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC32.41■■■□□ 2.78
Nup88Q8CEC0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
Nup88Q8CEC0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Nup88Q8CEC0 Gm26115-201ENSMUST00000175605 87 ntBASIC32.4■■■□□ 2.78
Nup88Q8CEC0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.37■■■□□ 2.77
Nup88Q8CEC0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.36■■■□□ 2.77
Nup88Q8CEC0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Nup88Q8CEC0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.34■■■□□ 2.77
Nup88Q8CEC0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Nup88Q8CEC0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC32.26■■■□□ 2.75
Nup88Q8CEC0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Nup88Q8CEC0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Nup88Q8CEC0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Nup88Q8CEC0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
Nup88Q8CEC0 Gm8109-201ENSMUST00000194076 746 ntBASIC32.17■■■□□ 2.74
Nup88Q8CEC0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Nup88Q8CEC0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Nup88Q8CEC0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Nup88Q8CEC0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.06■■■□□ 2.72
Nup88Q8CEC0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Nup88Q8CEC0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.02■■■□□ 2.72
Nup88Q8CEC0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.72
Nup88Q8CEC0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Nup88Q8CEC0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Nup88Q8CEC0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Nup88Q8CEC0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Nup88Q8CEC0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.93■■■□□ 2.7
Nup88Q8CEC0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Nup88Q8CEC0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Nup88Q8CEC0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Nup88Q8CEC0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Nup88Q8CEC0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Nup88Q8CEC0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
Nup88Q8CEC0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Nup88Q8CEC0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Nup88Q8CEC0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Nup88Q8CEC0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.72■■■□□ 2.67
Nup88Q8CEC0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Nup88Q8CEC0 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.68■■■□□ 2.66
Nup88Q8CEC0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.68■■■□□ 2.66
Nup88Q8CEC0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
Nup88Q8CEC0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Nup88Q8CEC0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Nup88Q8CEC0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.57■■■□□ 2.64
Nup88Q8CEC0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.57■■■□□ 2.64
Nup88Q8CEC0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Nup88Q8CEC0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Nup88Q8CEC0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Nup88Q8CEC0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Nup88Q8CEC0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Nup88Q8CEC0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Nup88Q8CEC0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
Nup88Q8CEC0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.39■■■□□ 2.62
Nup88Q8CEC0 Gm27322-201ENSMUST00000184007 104 ntBASIC31.38■■■□□ 2.61
Nup88Q8CEC0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Nup88Q8CEC0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
Nup88Q8CEC0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Nup88Q8CEC0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Nup88Q8CEC0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Nup88Q8CEC0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.28■■■□□ 2.6
Nup88Q8CEC0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
Nup88Q8CEC0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.23■■■□□ 2.59
Nup88Q8CEC0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
Nup88Q8CEC0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Nup88Q8CEC0 Gm24804-201ENSMUST00000174982 85 ntBASIC31.2■■■□□ 2.59
Nup88Q8CEC0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Nup88Q8CEC0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Nup88Q8CEC0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
Nup88Q8CEC0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Nup88Q8CEC0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Nup88Q8CEC0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Nup88Q8CEC0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Nup88Q8CEC0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
Nup88Q8CEC0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Nup88Q8CEC0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.03■■■□□ 2.56
Nup88Q8CEC0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Nup88Q8CEC0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Nup88Q8CEC0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Nup88Q8CEC0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.98■■■□□ 2.55
Nup88Q8CEC0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
Nup88Q8CEC0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.93■■■□□ 2.54
Nup88Q8CEC0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
Nup88Q8CEC0 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.87■■■□□ 2.53
Nup88Q8CEC0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Nup88Q8CEC0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
Nup88Q8CEC0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Nup88Q8CEC0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Nup88Q8CEC0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.75■■■□□ 2.51
Nup88Q8CEC0 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.73■■■□□ 2.51
Nup88Q8CEC0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Nup88Q8CEC0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.73■■■□□ 2.51
Nup88Q8CEC0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.72■■■□□ 2.51
Nup88Q8CEC0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Nup88Q8CEC0 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.7■■■□□ 2.51
Nup88Q8CEC0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
Nup88Q8CEC0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Nup88Q8CEC0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Nup88Q8CEC0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Nup88Q8CEC0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms