Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.91■■■□□ 2.22
Sh3rf3Q8C120 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Sh3rf3Q8C120 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.88■■■□□ 2.21
Sh3rf3Q8C120 Rab21-202ENSMUST00000218831 843 ntBASIC28.85■■■□□ 2.21
Sh3rf3Q8C120 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Sh3rf3Q8C120 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.81■■■□□ 2.2
Sh3rf3Q8C120 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Sh3rf3Q8C120 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
Sh3rf3Q8C120 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
Sh3rf3Q8C120 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.69■■■□□ 2.18
Sh3rf3Q8C120 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Sh3rf3Q8C120 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Sh3rf3Q8C120 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
Sh3rf3Q8C120 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Sh3rf3Q8C120 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Sh3rf3Q8C120 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Sh3rf3Q8C120 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.59■■■□□ 2.17
Sh3rf3Q8C120 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Sh3rf3Q8C120 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Sh3rf3Q8C120 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Sh3rf3Q8C120 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.51■■■□□ 2.15
Sh3rf3Q8C120 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Sh3rf3Q8C120 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.46■■■□□ 2.15
Sh3rf3Q8C120 Gm25262-201ENSMUST00000174934 133 ntBASIC28.42■■■□□ 2.14
Sh3rf3Q8C120 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Sh3rf3Q8C120 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.38■■■□□ 2.13
Sh3rf3Q8C120 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Sh3rf3Q8C120 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Sh3rf3Q8C120 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Sh3rf3Q8C120 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Sh3rf3Q8C120 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
Sh3rf3Q8C120 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Sh3rf3Q8C120 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.32■■■□□ 2.12
Sh3rf3Q8C120 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.31■■■□□ 2.12
Sh3rf3Q8C120 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Sh3rf3Q8C120 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Sh3rf3Q8C120 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Sh3rf3Q8C120 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.23■■■□□ 2.11
Sh3rf3Q8C120 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Sh3rf3Q8C120 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Sh3rf3Q8C120 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Sh3rf3Q8C120 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Sh3rf3Q8C120 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Sh3rf3Q8C120 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Sh3rf3Q8C120 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Sh3rf3Q8C120 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sh3rf3Q8C120 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sh3rf3Q8C120 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Sh3rf3Q8C120 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
Sh3rf3Q8C120 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Sh3rf3Q8C120 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
Sh3rf3Q8C120 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.95■■■□□ 2.07
Sh3rf3Q8C120 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Sh3rf3Q8C120 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Sh3rf3Q8C120 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Sh3rf3Q8C120 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Sh3rf3Q8C120 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.85■■■□□ 2.05
Sh3rf3Q8C120 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.84■■■□□ 2.05
Sh3rf3Q8C120 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
Sh3rf3Q8C120 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.78■■■□□ 2.04
Sh3rf3Q8C120 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Sh3rf3Q8C120 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Sh3rf3Q8C120 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.77■■■□□ 2.04
Sh3rf3Q8C120 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
Sh3rf3Q8C120 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Sh3rf3Q8C120 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Sh3rf3Q8C120 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Sh3rf3Q8C120 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Sh3rf3Q8C120 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.02
Sh3rf3Q8C120 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Sh3rf3Q8C120 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
Sh3rf3Q8C120 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.67■■■□□ 2.02
Sh3rf3Q8C120 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Sh3rf3Q8C120 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Sh3rf3Q8C120 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Sh3rf3Q8C120 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Sh3rf3Q8C120 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.6■■■□□ 2.01
Sh3rf3Q8C120 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
Sh3rf3Q8C120 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.54■■■□□ 2
Sh3rf3Q8C120 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.54■■■□□ 2
Sh3rf3Q8C120 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
Sh3rf3Q8C120 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
Sh3rf3Q8C120 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Sh3rf3Q8C120 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Sh3rf3Q8C120 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
Sh3rf3Q8C120 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
Sh3rf3Q8C120 Gm27322-201ENSMUST00000184007 104 ntBASIC27.52■■■□□ 2
Sh3rf3Q8C120 Gm8109-201ENSMUST00000194076 746 ntBASIC27.5■■□□□ 1.99
Sh3rf3Q8C120 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
Sh3rf3Q8C120 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.5■■□□□ 1.99
Sh3rf3Q8C120 Gm26115-201ENSMUST00000175605 87 ntBASIC27.49■■□□□ 1.99
Sh3rf3Q8C120 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.49■■□□□ 1.99
Sh3rf3Q8C120 Mipep-204ENSMUST00000225043 1548 ntBASIC27.48■■□□□ 1.99
Sh3rf3Q8C120 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Sh3rf3Q8C120 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Sh3rf3Q8C120 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.43■■□□□ 1.98
Sh3rf3Q8C120 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Sh3rf3Q8C120 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.42■■□□□ 1.98
Sh3rf3Q8C120 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.41■■□□□ 1.98
Sh3rf3Q8C120 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.4■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms