Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
Rab11fip4Q8BQP8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.56■■■□□ 2.48
Rab11fip4Q8BQP8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
Rab11fip4Q8BQP8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.52■■■□□ 2.48
Rab11fip4Q8BQP8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Rab11fip4Q8BQP8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Rab11fip4Q8BQP8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Rab11fip4Q8BQP8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Rab11fip4Q8BQP8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Rab11fip4Q8BQP8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Rab11fip4Q8BQP8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Rab11fip4Q8BQP8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Rab11fip4Q8BQP8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Rab11fip4Q8BQP8 Gm8109-201ENSMUST00000194076 746 ntBASIC30.36■■■□□ 2.45
Rab11fip4Q8BQP8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Rab11fip4Q8BQP8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
Rab11fip4Q8BQP8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Rab11fip4Q8BQP8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.27■■■□□ 2.44
Rab11fip4Q8BQP8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.27■■■□□ 2.44
Rab11fip4Q8BQP8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.26■■■□□ 2.43
Rab11fip4Q8BQP8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rab11fip4Q8BQP8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rab11fip4Q8BQP8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Rab11fip4Q8BQP8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Rab11fip4Q8BQP8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Rab11fip4Q8BQP8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Rab11fip4Q8BQP8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Rab11fip4Q8BQP8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.16■■■□□ 2.42
Rab11fip4Q8BQP8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Rab11fip4Q8BQP8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.1■■■□□ 2.41
Rab11fip4Q8BQP8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Rab11fip4Q8BQP8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Rab11fip4Q8BQP8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Rab11fip4Q8BQP8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
Rab11fip4Q8BQP8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.98■■■□□ 2.39
Rab11fip4Q8BQP8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Rab11fip4Q8BQP8 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.88■■■□□ 2.37
Rab11fip4Q8BQP8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Rab11fip4Q8BQP8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Rab11fip4Q8BQP8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Rab11fip4Q8BQP8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.77■■■□□ 2.36
Rab11fip4Q8BQP8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Rab11fip4Q8BQP8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Rab11fip4Q8BQP8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
Rab11fip4Q8BQP8 Gm27322-201ENSMUST00000184007 104 ntBASIC29.71■■■□□ 2.35
Rab11fip4Q8BQP8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.7■■■□□ 2.35
Rab11fip4Q8BQP8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Rab11fip4Q8BQP8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Rab11fip4Q8BQP8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.65■■■□□ 2.34
Rab11fip4Q8BQP8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
Rab11fip4Q8BQP8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Rab11fip4Q8BQP8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Rab11fip4Q8BQP8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Rab11fip4Q8BQP8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.61■■■□□ 2.33
Rab11fip4Q8BQP8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rab11fip4Q8BQP8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rab11fip4Q8BQP8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Rab11fip4Q8BQP8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Rab11fip4Q8BQP8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Rab11fip4Q8BQP8 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.54■■■□□ 2.32
Rab11fip4Q8BQP8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Rab11fip4Q8BQP8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Rab11fip4Q8BQP8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Rab11fip4Q8BQP8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Rab11fip4Q8BQP8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
Rab11fip4Q8BQP8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.42■■■□□ 2.3
Rab11fip4Q8BQP8 Gm24804-201ENSMUST00000174982 85 ntBASIC29.36■■■□□ 2.29
Rab11fip4Q8BQP8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Rab11fip4Q8BQP8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Rab11fip4Q8BQP8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Rab11fip4Q8BQP8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Rab11fip4Q8BQP8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29.34■■■□□ 2.29
Rab11fip4Q8BQP8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Rab11fip4Q8BQP8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.28■■■□□ 2.28
Rab11fip4Q8BQP8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Rab11fip4Q8BQP8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
Rab11fip4Q8BQP8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Rab11fip4Q8BQP8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rab11fip4Q8BQP8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
Rab11fip4Q8BQP8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Rab11fip4Q8BQP8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
Rab11fip4Q8BQP8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.11■■■□□ 2.25
Rab11fip4Q8BQP8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Rab11fip4Q8BQP8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Rab11fip4Q8BQP8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Rab11fip4Q8BQP8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Rab11fip4Q8BQP8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.08■■■□□ 2.25
Rab11fip4Q8BQP8 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.05■■■□□ 2.24
Rab11fip4Q8BQP8 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.05■■■□□ 2.24
Rab11fip4Q8BQP8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Rab11fip4Q8BQP8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29■■■□□ 2.23
Rab11fip4Q8BQP8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.99■■■□□ 2.23
Rab11fip4Q8BQP8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.98■■■□□ 2.23
Rab11fip4Q8BQP8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rab11fip4Q8BQP8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
Rab11fip4Q8BQP8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Rab11fip4Q8BQP8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Rab11fip4Q8BQP8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Rab11fip4Q8BQP8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Rab11fip4Q8BQP8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms