Protein–RNA interactions for Protein: Q6PDH4

Ranbp3l, Ran-binding protein 3-like, mousemouse

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ranbp3lQ6PDH4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ranbp3lQ6PDH4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Ranbp3lQ6PDH4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ranbp3lQ6PDH4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ranbp3lQ6PDH4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ranbp3lQ6PDH4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ranbp3lQ6PDH4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ranbp3lQ6PDH4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.09■■□□□ 1.45
Ranbp3lQ6PDH4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ranbp3lQ6PDH4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.05■■□□□ 1.44
Ranbp3lQ6PDH4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ranbp3lQ6PDH4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.04■■□□□ 1.44
Ranbp3lQ6PDH4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ranbp3lQ6PDH4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.03■■□□□ 1.44
Ranbp3lQ6PDH4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24■■□□□ 1.43
Ranbp3lQ6PDH4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ranbp3lQ6PDH4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
Ranbp3lQ6PDH4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Ranbp3lQ6PDH4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ranbp3lQ6PDH4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Ranbp3lQ6PDH4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ranbp3lQ6PDH4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.87■■□□□ 1.41
Ranbp3lQ6PDH4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ranbp3lQ6PDH4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ranbp3lQ6PDH4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ranbp3lQ6PDH4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.84■■□□□ 1.41
Ranbp3lQ6PDH4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ranbp3lQ6PDH4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ranbp3lQ6PDH4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.78■■□□□ 1.4
Ranbp3lQ6PDH4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ranbp3lQ6PDH4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.77■■□□□ 1.4
Ranbp3lQ6PDH4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ranbp3lQ6PDH4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ranbp3lQ6PDH4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.71■■□□□ 1.39
Ranbp3lQ6PDH4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Ranbp3lQ6PDH4 Rab21-202ENSMUST00000218831 843 ntBASIC23.65■■□□□ 1.38
Ranbp3lQ6PDH4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Ranbp3lQ6PDH4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ranbp3lQ6PDH4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ranbp3lQ6PDH4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ranbp3lQ6PDH4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ranbp3lQ6PDH4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ranbp3lQ6PDH4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ranbp3lQ6PDH4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ranbp3lQ6PDH4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ranbp3lQ6PDH4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ranbp3lQ6PDH4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ranbp3lQ6PDH4 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.52■■□□□ 1.36
Ranbp3lQ6PDH4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
Ranbp3lQ6PDH4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ranbp3lQ6PDH4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ranbp3lQ6PDH4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.49■■□□□ 1.35
Ranbp3lQ6PDH4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ranbp3lQ6PDH4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ranbp3lQ6PDH4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.44■■□□□ 1.34
Ranbp3lQ6PDH4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.44■■□□□ 1.34
Ranbp3lQ6PDH4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ranbp3lQ6PDH4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.43■■□□□ 1.34
Ranbp3lQ6PDH4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Ranbp3lQ6PDH4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
Ranbp3lQ6PDH4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Ranbp3lQ6PDH4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ranbp3lQ6PDH4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Ranbp3lQ6PDH4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Ranbp3lQ6PDH4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.31■■□□□ 1.32
Ranbp3lQ6PDH4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ranbp3lQ6PDH4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ranbp3lQ6PDH4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ranbp3lQ6PDH4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ranbp3lQ6PDH4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.26■■□□□ 1.31
Ranbp3lQ6PDH4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ranbp3lQ6PDH4 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.25■■□□□ 1.31
Ranbp3lQ6PDH4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
Ranbp3lQ6PDH4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ranbp3lQ6PDH4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ranbp3lQ6PDH4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ranbp3lQ6PDH4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ranbp3lQ6PDH4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ranbp3lQ6PDH4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ranbp3lQ6PDH4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ranbp3lQ6PDH4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ranbp3lQ6PDH4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ranbp3lQ6PDH4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ranbp3lQ6PDH4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ranbp3lQ6PDH4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ranbp3lQ6PDH4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ranbp3lQ6PDH4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ranbp3lQ6PDH4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ranbp3lQ6PDH4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ranbp3lQ6PDH4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ranbp3lQ6PDH4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ranbp3lQ6PDH4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ranbp3lQ6PDH4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Ranbp3lQ6PDH4 Zxda-201ENSMUST00000117281 2621 ntBASIC23.07■■□□□ 1.28
Ranbp3lQ6PDH4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ranbp3lQ6PDH4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ranbp3lQ6PDH4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.03■■□□□ 1.28
Ranbp3lQ6PDH4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ranbp3lQ6PDH4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ranbp3lQ6PDH4 Gm25262-201ENSMUST00000174934 133 ntBASIC23.02■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 150.6 ms