Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cln6Q3U466 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cln6Q3U466 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cln6Q3U466 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cln6Q3U466 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cln6Q3U466 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.88■■□□□ 1.25
Cln6Q3U466 Gm25238-201ENSMUST00000174914 89 ntBASIC22.86■■□□□ 1.25
Cln6Q3U466 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.86■■□□□ 1.25
Cln6Q3U466 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.84■■□□□ 1.25
Cln6Q3U466 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
Cln6Q3U466 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cln6Q3U466 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cln6Q3U466 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cln6Q3U466 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.73■■□□□ 1.23
Cln6Q3U466 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cln6Q3U466 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Cln6Q3U466 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cln6Q3U466 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cln6Q3U466 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cln6Q3U466 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.63■■□□□ 1.21
Cln6Q3U466 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cln6Q3U466 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cln6Q3U466 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Cln6Q3U466 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cln6Q3U466 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Cln6Q3U466 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.57■■□□□ 1.2
Cln6Q3U466 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Cln6Q3U466 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cln6Q3U466 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.56■■□□□ 1.2
Cln6Q3U466 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cln6Q3U466 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Cln6Q3U466 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
Cln6Q3U466 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.53■■□□□ 1.2
Cln6Q3U466 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cln6Q3U466 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cln6Q3U466 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Cln6Q3U466 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cln6Q3U466 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.46■■□□□ 1.19
Cln6Q3U466 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cln6Q3U466 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Cln6Q3U466 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cln6Q3U466 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cln6Q3U466 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cln6Q3U466 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Cln6Q3U466 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Cln6Q3U466 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.41■■□□□ 1.18
Cln6Q3U466 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Cln6Q3U466 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cln6Q3U466 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cln6Q3U466 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cln6Q3U466 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.37■■□□□ 1.17
Cln6Q3U466 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.36■■□□□ 1.17
Cln6Q3U466 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cln6Q3U466 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cln6Q3U466 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.34■■□□□ 1.17
Cln6Q3U466 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Cln6Q3U466 Rab21-202ENSMUST00000218831 843 ntBASIC22.31■■□□□ 1.16
Cln6Q3U466 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cln6Q3U466 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cln6Q3U466 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cln6Q3U466 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cln6Q3U466 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.22■■□□□ 1.15
Cln6Q3U466 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cln6Q3U466 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cln6Q3U466 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cln6Q3U466 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cln6Q3U466 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cln6Q3U466 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.16■■□□□ 1.14
Cln6Q3U466 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cln6Q3U466 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.15■■□□□ 1.14
Cln6Q3U466 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.15■■□□□ 1.14
Cln6Q3U466 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Cln6Q3U466 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cln6Q3U466 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cln6Q3U466 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cln6Q3U466 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cln6Q3U466 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cln6Q3U466 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Cln6Q3U466 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cln6Q3U466 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.08■■□□□ 1.13
Cln6Q3U466 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cln6Q3U466 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cln6Q3U466 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cln6Q3U466 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cln6Q3U466 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cln6Q3U466 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Cln6Q3U466 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cln6Q3U466 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cln6Q3U466 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cln6Q3U466 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cln6Q3U466 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cln6Q3U466 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Cln6Q3U466 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cln6Q3U466 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Cln6Q3U466 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cln6Q3U466 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cln6Q3U466 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.96■■□□□ 1.11
Cln6Q3U466 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Cln6Q3U466 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.88■■□□□ 1.09
Cln6Q3U466 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms