Protein–RNA interactions for Protein: Q2WF71

Lrfn1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, mousemouse

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn1Q2WF71 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Lrfn1Q2WF71 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.74■■□□□ 1.55
Lrfn1Q2WF71 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Lrfn1Q2WF71 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Lrfn1Q2WF71 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.67■■□□□ 1.54
Lrfn1Q2WF71 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Lrfn1Q2WF71 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Lrfn1Q2WF71 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Lrfn1Q2WF71 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Lrfn1Q2WF71 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
Lrfn1Q2WF71 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Lrfn1Q2WF71 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Lrfn1Q2WF71 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Lrfn1Q2WF71 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Lrfn1Q2WF71 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Lrfn1Q2WF71 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
Lrfn1Q2WF71 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.49■■□□□ 1.51
Lrfn1Q2WF71 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.49■■□□□ 1.51
Lrfn1Q2WF71 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Lrfn1Q2WF71 Gm27325-201ENSMUST00000175467 74 ntBASIC24.47■■□□□ 1.51
Lrfn1Q2WF71 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Lrfn1Q2WF71 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Lrfn1Q2WF71 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Lrfn1Q2WF71 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Lrfn1Q2WF71 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Lrfn1Q2WF71 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Lrfn1Q2WF71 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.38■■□□□ 1.49
Lrfn1Q2WF71 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Lrfn1Q2WF71 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lrfn1Q2WF71 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lrfn1Q2WF71 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Lrfn1Q2WF71 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Lrfn1Q2WF71 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Lrfn1Q2WF71 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Lrfn1Q2WF71 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Lrfn1Q2WF71 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.24■■□□□ 1.47
Lrfn1Q2WF71 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.23■■□□□ 1.47
Lrfn1Q2WF71 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Lrfn1Q2WF71 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Lrfn1Q2WF71 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Lrfn1Q2WF71 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Lrfn1Q2WF71 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Lrfn1Q2WF71 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.18■■□□□ 1.46
Lrfn1Q2WF71 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.15■■□□□ 1.46
Lrfn1Q2WF71 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
Lrfn1Q2WF71 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.12■■□□□ 1.45
Lrfn1Q2WF71 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Lrfn1Q2WF71 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Lrfn1Q2WF71 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Lrfn1Q2WF71 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
Lrfn1Q2WF71 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Lrfn1Q2WF71 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Lrfn1Q2WF71 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Lrfn1Q2WF71 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Lrfn1Q2WF71 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Lrfn1Q2WF71 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Lrfn1Q2WF71 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24■■□□□ 1.43
Lrfn1Q2WF71 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Lrfn1Q2WF71 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Lrfn1Q2WF71 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Lrfn1Q2WF71 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Lrfn1Q2WF71 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Lrfn1Q2WF71 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Lrfn1Q2WF71 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Lrfn1Q2WF71 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Lrfn1Q2WF71 Rab21-202ENSMUST00000218831 843 ntBASIC23.91■■□□□ 1.42
Lrfn1Q2WF71 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Lrfn1Q2WF71 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Lrfn1Q2WF71 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Lrfn1Q2WF71 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Lrfn1Q2WF71 Gm25262-201ENSMUST00000174934 133 ntBASIC23.86■■□□□ 1.41
Lrfn1Q2WF71 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Lrfn1Q2WF71 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Lrfn1Q2WF71 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.84■■□□□ 1.41
Lrfn1Q2WF71 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Lrfn1Q2WF71 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.81■■□□□ 1.4
Lrfn1Q2WF71 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Lrfn1Q2WF71 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Lrfn1Q2WF71 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Lrfn1Q2WF71 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
Lrfn1Q2WF71 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.71■■□□□ 1.39
Lrfn1Q2WF71 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Lrfn1Q2WF71 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Lrfn1Q2WF71 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Lrfn1Q2WF71 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Lrfn1Q2WF71 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Lrfn1Q2WF71 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Lrfn1Q2WF71 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.66■■□□□ 1.38
Lrfn1Q2WF71 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Lrfn1Q2WF71 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.66■■□□□ 1.38
Lrfn1Q2WF71 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Lrfn1Q2WF71 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Lrfn1Q2WF71 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.62■■□□□ 1.37
Lrfn1Q2WF71 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Lrfn1Q2WF71 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Lrfn1Q2WF71 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Lrfn1Q2WF71 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Lrfn1Q2WF71 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Lrfn1Q2WF71 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.57■■□□□ 1.36
Lrfn1Q2WF71 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms