Protein–RNA interactions for Protein: P63054

Pcp4, Calmodulin regulator protein PCP4, mousemouse

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcp4P63054 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pcp4P63054 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcp4P63054 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcp4P63054 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcp4P63054 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcp4P63054 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcp4P63054 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcp4P63054 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcp4P63054 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcp4P63054 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcp4P63054 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcp4P63054 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcp4P63054 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcp4P63054 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcp4P63054 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Pcp4P63054 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcp4P63054 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcp4P63054 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Pcp4P63054 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Pcp4P63054 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcp4P63054 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcp4P63054 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcp4P63054 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcp4P63054 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcp4P63054 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pcp4P63054 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcp4P63054 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcp4P63054 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcp4P63054 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcp4P63054 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcp4P63054 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcp4P63054 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcp4P63054 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcp4P63054 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcp4P63054 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Pcp4P63054 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcp4P63054 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcp4P63054 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcp4P63054 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Pcp4P63054 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcp4P63054 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcp4P63054 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcp4P63054 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcp4P63054 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcp4P63054 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.42■□□□□ 0.54
Pcp4P63054 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcp4P63054 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcp4P63054 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcp4P63054 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Pcp4P63054 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcp4P63054 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcp4P63054 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcp4P63054 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcp4P63054 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcp4P63054 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcp4P63054 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pcp4P63054 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcp4P63054 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcp4P63054 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcp4P63054 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcp4P63054 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcp4P63054 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcp4P63054 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pcp4P63054 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pcp4P63054 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcp4P63054 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcp4P63054 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.26■□□□□ 0.51
Pcp4P63054 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcp4P63054 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcp4P63054 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcp4P63054 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcp4P63054 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcp4P63054 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcp4P63054 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcp4P63054 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Pcp4P63054 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcp4P63054 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcp4P63054 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcp4P63054 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcp4P63054 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcp4P63054 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.18■□□□□ 0.5
Pcp4P63054 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.15■□□□□ 0.5
Pcp4P63054 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcp4P63054 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcp4P63054 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcp4P63054 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcp4P63054 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcp4P63054 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcp4P63054 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcp4P63054 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Pcp4P63054 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcp4P63054 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pcp4P63054 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcp4P63054 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcp4P63054 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.09■□□□□ 0.49
Pcp4P63054 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcp4P63054 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.08■□□□□ 0.49
Pcp4P63054 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Pcp4P63054 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcp4P63054 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms