Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30,85■■■□□ 2,53
Nek1P51954 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30,84■■■□□ 2,53
Nek1P51954 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30,83■■■□□ 2,53
Nek1P51954 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30,82■■■□□ 2,52
Nek1P51954 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30,82■■■□□ 2,52
Nek1P51954 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30,82■■■□□ 2,52
Nek1P51954 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30,81■■■□□ 2,52
Nek1P51954 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30,78■■■□□ 2,52
Nek1P51954 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30,7■■■□□ 2,51
Nek1P51954 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30,63■■■□□ 2,49
Nek1P51954 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30,59■■■□□ 2,49
Nek1P51954 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30,55■■■□□ 2,48
Nek1P51954 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30,53■■■□□ 2,48
Nek1P51954 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30,52■■■□□ 2,48
Nek1P51954 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30,5■■■□□ 2,47
Nek1P51954 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30,47■■■□□ 2,47
Nek1P51954 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30,45■■■□□ 2,46
Nek1P51954 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30,43■■■□□ 2,46
Nek1P51954 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30,42■■■□□ 2,46
Nek1P51954 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30,41■■■□□ 2,46
Nek1P51954 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30,38■■■□□ 2,45
Nek1P51954 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30,37■■■□□ 2,45
Nek1P51954 Rab21-202ENSMUST00000218831 843 ntBASIC30,35■■■□□ 2,45
Nek1P51954 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30,32■■■□□ 2,44
Nek1P51954 Gm26115-201ENSMUST00000175605 87 ntBASIC30,28■■■□□ 2,44
Nek1P51954 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30,26■■■□□ 2,43
Nek1P51954 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30,25■■■□□ 2,43
Nek1P51954 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30,25■■■□□ 2,43
Nek1P51954 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30,24■■■□□ 2,43
Nek1P51954 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30,24■■■□□ 2,43
Nek1P51954 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30,24■■■□□ 2,43
Nek1P51954 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30,21■■■□□ 2,43
Nek1P51954 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30,19■■■□□ 2,42
Nek1P51954 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30,19■■■□□ 2,42
Nek1P51954 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30,16■■■□□ 2,42
Nek1P51954 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30,15■■■□□ 2,42
Nek1P51954 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30,13■■■□□ 2,41
Nek1P51954 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30,13■■■□□ 2,41
Nek1P51954 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30,09■■■□□ 2,41
Nek1P51954 Gm8109-201ENSMUST00000194076 746 ntBASIC30,08■■■□□ 2,41
Nek1P51954 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30,07■■■□□ 2,4
Nek1P51954 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30,06■■■□□ 2,4
Nek1P51954 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30,05■■■□□ 2,4
Nek1P51954 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30,02■■■□□ 2,4
Nek1P51954 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29,99■■■□□ 2,39
Nek1P51954 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29,99■■■□□ 2,39
Nek1P51954 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29,97■■■□□ 2,39
Nek1P51954 Zfp131-207ENSMUST00000224946 1783 ntBASIC29,96■■■□□ 2,39
Nek1P51954 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29,95■■■□□ 2,39
Nek1P51954 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29,95■■■□□ 2,38
Nek1P51954 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29,94■■■□□ 2,38
Nek1P51954 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29,9■■■□□ 2,38
Nek1P51954 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29,88■■■□□ 2,37
Nek1P51954 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29,85■■■□□ 2,37
Nek1P51954 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29,81■■■□□ 2,36
Nek1P51954 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29,79■■■□□ 2,36
Nek1P51954 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29,79■■■□□ 2,36
Nek1P51954 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29,75■■■□□ 2,35
Nek1P51954 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29,73■■■□□ 2,35
Nek1P51954 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29,72■■■□□ 2,35
Nek1P51954 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29,72■■■□□ 2,35
Nek1P51954 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29,71■■■□□ 2,35
Nek1P51954 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29,71■■■□□ 2,35
Nek1P51954 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29,71■■■□□ 2,35
Nek1P51954 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29,69■■■□□ 2,34
Nek1P51954 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29,66■■■□□ 2,34
Nek1P51954 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29,65■■■□□ 2,34
Nek1P51954 Gm2415-204ENSMUST00000190235 2004 ntBASIC29,62■■■□□ 2,33
Nek1P51954 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29,61■■■□□ 2,33
Nek1P51954 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29,6■■■□□ 2,33
Nek1P51954 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29,59■■■□□ 2,33
Nek1P51954 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29,57■■■□□ 2,32
Nek1P51954 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29,56■■■□□ 2,32
Nek1P51954 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29,55■■■□□ 2,32
Nek1P51954 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29,55■■■□□ 2,32
Nek1P51954 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC29,53■■■□□ 2,32
Nek1P51954 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC29,53■■■□□ 2,32
Nek1P51954 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29,52■■■□□ 2,32
Nek1P51954 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29,5■■■□□ 2,31
Nek1P51954 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29,5■■■□□ 2,31
Nek1P51954 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29,5■■■□□ 2,31
Nek1P51954 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29,46■■■□□ 2,31
Nek1P51954 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29,44■■■□□ 2,3
Nek1P51954 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29,43■■■□□ 2,3
Nek1P51954 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29,4■■■□□ 2,3
Nek1P51954 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29,39■■■□□ 2,3
Nek1P51954 Gm6658-202ENSMUST00000209493 1885 ntBASIC29,38■■■□□ 2,29
Nek1P51954 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29,36■■■□□ 2,29
Nek1P51954 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29,35■■■□□ 2,29
Nek1P51954 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29,35■■■□□ 2,29
Nek1P51954 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29,33■■■□□ 2,29
Nek1P51954 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29,32■■■□□ 2,28
Nek1P51954 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29,31■■■□□ 2,28
Nek1P51954 Gm17082-201ENSMUST00000166043 1091 ntBASIC29,3■■■□□ 2,28
Nek1P51954 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29,24■■■□□ 2,27
Nek1P51954 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC29,23■■■□□ 2,27
Nek1P51954 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29,23■■■□□ 2,27
Nek1P51954 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29,23■■■□□ 2,27
Nek1P51954 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC29,22■■■□□ 2,27
Nek1P51954 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29,22■■■□□ 2,27
Retrieved 100 of 76,532 protein–RNA pairs in 45,7 ms