Protein–RNA interactions for Protein: P28311

Defa4, Alpha-defensin 4, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defa4P28311 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Defa4P28311 Gm42596-201ENSMUST00000196305 1958 ntBASIC18.21■□□□□ 0.5
Defa4P28311 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.18■□□□□ 0.5
Defa4P28311 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Defa4P28311 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Defa4P28311 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Defa4P28311 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Defa4P28311 Zxda-201ENSMUST00000117281 2621 ntBASIC18.1■□□□□ 0.49
Defa4P28311 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Defa4P28311 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Defa4P28311 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Defa4P28311 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Defa4P28311 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Defa4P28311 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Defa4P28311 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Defa4P28311 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Defa4P28311 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Defa4P28311 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Defa4P28311 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Defa4P28311 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Defa4P28311 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Defa4P28311 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Defa4P28311 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Defa4P28311 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Defa4P28311 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Defa4P28311 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Defa4P28311 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Defa4P28311 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18■□□□□ 0.47
Defa4P28311 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
Defa4P28311 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Defa4P28311 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Defa4P28311 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Defa4P28311 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Defa4P28311 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Defa4P28311 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Defa4P28311 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC17.94■□□□□ 0.46
Defa4P28311 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Defa4P28311 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Defa4P28311 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
Defa4P28311 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Defa4P28311 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Defa4P28311 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Defa4P28311 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Defa4P28311 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Defa4P28311 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17.86■□□□□ 0.45
Defa4P28311 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.85■□□□□ 0.45
Defa4P28311 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Defa4P28311 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Defa4P28311 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Defa4P28311 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Defa4P28311 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Defa4P28311 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Defa4P28311 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.82■□□□□ 0.44
Defa4P28311 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Defa4P28311 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Defa4P28311 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Defa4P28311 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Defa4P28311 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Defa4P28311 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.79■□□□□ 0.44
Defa4P28311 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Defa4P28311 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Defa4P28311 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Defa4P28311 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Defa4P28311 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
Defa4P28311 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.76■□□□□ 0.43
Defa4P28311 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Defa4P28311 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Defa4P28311 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.74■□□□□ 0.43
Defa4P28311 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Defa4P28311 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Defa4P28311 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Defa4P28311 Gm27325-201ENSMUST00000175467 74 ntBASIC17.7■□□□□ 0.42
Defa4P28311 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Defa4P28311 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Defa4P28311 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Defa4P28311 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Defa4P28311 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Defa4P28311 Gm25238-201ENSMUST00000174914 89 ntBASIC17.65■□□□□ 0.42
Defa4P28311 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Defa4P28311 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Defa4P28311 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Defa4P28311 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Defa4P28311 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Defa4P28311 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC17.62■□□□□ 0.41
Defa4P28311 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Defa4P28311 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Defa4P28311 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Defa4P28311 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Defa4P28311 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Defa4P28311 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Defa4P28311 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Defa4P28311 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Defa4P28311 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.57■□□□□ 0.4
Defa4P28311 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Defa4P28311 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Defa4P28311 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Defa4P28311 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC17.55■□□□□ 0.4
Defa4P28311 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Defa4P28311 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Defa4P28311 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms