Protein–RNA interactions for Protein: L7N280

Gm21962, Predicted gene, 21962, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21962L7N280 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Gm21962L7N280 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.27■■■□□ 2.12
Gm21962L7N280 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Gm21962L7N280 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Gm21962L7N280 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.23■■■□□ 2.11
Gm21962L7N280 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.22■■■□□ 2.11
Gm21962L7N280 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Gm21962L7N280 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
Gm21962L7N280 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Gm21962L7N280 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Gm21962L7N280 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Gm21962L7N280 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Gm21962L7N280 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Gm21962L7N280 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Gm21962L7N280 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
Gm21962L7N280 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.02■■■□□ 2.08
Gm21962L7N280 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Gm21962L7N280 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28■■■□□ 2.07
Gm21962L7N280 Rab21-202ENSMUST00000218831 843 ntBASIC28■■■□□ 2.07
Gm21962L7N280 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.97■■■□□ 2.07
Gm21962L7N280 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
Gm21962L7N280 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Gm21962L7N280 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.92■■■□□ 2.06
Gm21962L7N280 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.89■■■□□ 2.06
Gm21962L7N280 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Gm21962L7N280 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.84■■■□□ 2.05
Gm21962L7N280 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Gm21962L7N280 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
Gm21962L7N280 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Gm21962L7N280 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.04
Gm21962L7N280 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Gm21962L7N280 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Gm21962L7N280 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Gm21962L7N280 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Gm21962L7N280 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.67■■■□□ 2.02
Gm21962L7N280 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
Gm21962L7N280 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Gm21962L7N280 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Gm21962L7N280 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.62■■■□□ 2.01
Gm21962L7N280 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Gm21962L7N280 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Gm21962L7N280 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.6■■■□□ 2.01
Gm21962L7N280 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Gm21962L7N280 Gm25262-201ENSMUST00000174934 133 ntBASIC27.58■■■□□ 2.01
Gm21962L7N280 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.57■■■□□ 2
Gm21962L7N280 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.55■■■□□ 2
Gm21962L7N280 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.52■■■□□ 2
Gm21962L7N280 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Gm21962L7N280 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Gm21962L7N280 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
Gm21962L7N280 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
Gm21962L7N280 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Gm21962L7N280 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Gm21962L7N280 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Gm21962L7N280 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Gm21962L7N280 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.43■■□□□ 1.98
Gm21962L7N280 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Gm21962L7N280 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Gm21962L7N280 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Gm21962L7N280 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.38■■□□□ 1.97
Gm21962L7N280 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.35■■□□□ 1.97
Gm21962L7N280 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Gm21962L7N280 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Gm21962L7N280 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
Gm21962L7N280 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Gm21962L7N280 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Gm21962L7N280 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.26■■□□□ 1.95
Gm21962L7N280 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.25■■□□□ 1.95
Gm21962L7N280 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Gm21962L7N280 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Gm21962L7N280 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
Gm21962L7N280 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Gm21962L7N280 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.15■■□□□ 1.94
Gm21962L7N280 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Gm21962L7N280 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Gm21962L7N280 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Gm21962L7N280 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Gm21962L7N280 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Gm21962L7N280 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Gm21962L7N280 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.11■■□□□ 1.93
Gm21962L7N280 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
Gm21962L7N280 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
Gm21962L7N280 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.05■■□□□ 1.92
Gm21962L7N280 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.04■■□□□ 1.92
Gm21962L7N280 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.03■■□□□ 1.92
Gm21962L7N280 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27■■□□□ 1.91
Gm21962L7N280 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Gm21962L7N280 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Gm21962L7N280 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.96■■□□□ 1.91
Gm21962L7N280 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
Gm21962L7N280 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Gm21962L7N280 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Gm21962L7N280 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.92■■□□□ 1.9
Gm21962L7N280 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Gm21962L7N280 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Gm21962L7N280 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Gm21962L7N280 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Gm21962L7N280 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Gm21962L7N280 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Gm21962L7N280 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms