Protein–RNA interactions for Protein: J3QMJ4

Smlr1, Small leucine-rich protein 1, mousemouse

Predictions only

Length 66 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smlr1J3QMJ4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smlr1J3QMJ4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smlr1J3QMJ4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smlr1J3QMJ4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Smlr1J3QMJ4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Smlr1J3QMJ4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smlr1J3QMJ4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smlr1J3QMJ4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
Smlr1J3QMJ4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smlr1J3QMJ4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smlr1J3QMJ4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smlr1J3QMJ4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smlr1J3QMJ4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smlr1J3QMJ4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smlr1J3QMJ4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smlr1J3QMJ4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.63■□□□□ 0.41
Smlr1J3QMJ4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smlr1J3QMJ4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smlr1J3QMJ4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smlr1J3QMJ4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smlr1J3QMJ4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.6■□□□□ 0.41
Smlr1J3QMJ4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smlr1J3QMJ4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smlr1J3QMJ4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smlr1J3QMJ4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smlr1J3QMJ4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smlr1J3QMJ4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Smlr1J3QMJ4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smlr1J3QMJ4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smlr1J3QMJ4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smlr1J3QMJ4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smlr1J3QMJ4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smlr1J3QMJ4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smlr1J3QMJ4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17.46■□□□□ 0.39
Smlr1J3QMJ4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smlr1J3QMJ4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smlr1J3QMJ4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smlr1J3QMJ4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.42■□□□□ 0.38
Smlr1J3QMJ4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smlr1J3QMJ4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smlr1J3QMJ4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Smlr1J3QMJ4 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.37■□□□□ 0.37
Smlr1J3QMJ4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smlr1J3QMJ4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.35■□□□□ 0.37
Smlr1J3QMJ4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smlr1J3QMJ4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smlr1J3QMJ4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smlr1J3QMJ4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smlr1J3QMJ4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.31■□□□□ 0.36
Smlr1J3QMJ4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smlr1J3QMJ4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smlr1J3QMJ4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smlr1J3QMJ4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Smlr1J3QMJ4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smlr1J3QMJ4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smlr1J3QMJ4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
Smlr1J3QMJ4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smlr1J3QMJ4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smlr1J3QMJ4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Smlr1J3QMJ4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Smlr1J3QMJ4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smlr1J3QMJ4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smlr1J3QMJ4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smlr1J3QMJ4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Smlr1J3QMJ4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smlr1J3QMJ4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Smlr1J3QMJ4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smlr1J3QMJ4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smlr1J3QMJ4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smlr1J3QMJ4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Smlr1J3QMJ4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smlr1J3QMJ4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Smlr1J3QMJ4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smlr1J3QMJ4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smlr1J3QMJ4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smlr1J3QMJ4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smlr1J3QMJ4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smlr1J3QMJ4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smlr1J3QMJ4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smlr1J3QMJ4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smlr1J3QMJ4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smlr1J3QMJ4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smlr1J3QMJ4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Smlr1J3QMJ4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smlr1J3QMJ4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smlr1J3QMJ4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smlr1J3QMJ4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Smlr1J3QMJ4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Smlr1J3QMJ4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Smlr1J3QMJ4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Smlr1J3QMJ4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Smlr1J3QMJ4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Smlr1J3QMJ4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smlr1J3QMJ4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Smlr1J3QMJ4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Smlr1J3QMJ4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smlr1J3QMJ4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smlr1J3QMJ4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smlr1J3QMJ4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smlr1J3QMJ4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms