Protein–RNA interactions for Protein: E0CZH3

Foxi3, Forkhead box I3, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxi3E0CZH3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Foxi3E0CZH3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Foxi3E0CZH3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.89■□□□□ 0.93
Foxi3E0CZH3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Foxi3E0CZH3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Foxi3E0CZH3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Foxi3E0CZH3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Foxi3E0CZH3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.81■□□□□ 0.92
Foxi3E0CZH3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Foxi3E0CZH3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Foxi3E0CZH3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxi3E0CZH3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxi3E0CZH3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Foxi3E0CZH3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Foxi3E0CZH3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxi3E0CZH3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxi3E0CZH3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Foxi3E0CZH3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Foxi3E0CZH3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.6■□□□□ 0.89
Foxi3E0CZH3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Foxi3E0CZH3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Foxi3E0CZH3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxi3E0CZH3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxi3E0CZH3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxi3E0CZH3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Foxi3E0CZH3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Foxi3E0CZH3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Foxi3E0CZH3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Foxi3E0CZH3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Foxi3E0CZH3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.43■□□□□ 0.86
Foxi3E0CZH3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Foxi3E0CZH3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Foxi3E0CZH3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Foxi3E0CZH3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Foxi3E0CZH3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Foxi3E0CZH3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Foxi3E0CZH3 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.37■□□□□ 0.85
Foxi3E0CZH3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Foxi3E0CZH3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Foxi3E0CZH3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Foxi3E0CZH3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Foxi3E0CZH3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Foxi3E0CZH3 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.25■□□□□ 0.83
Foxi3E0CZH3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxi3E0CZH3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxi3E0CZH3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Foxi3E0CZH3 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.2■□□□□ 0.82
Foxi3E0CZH3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxi3E0CZH3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxi3E0CZH3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxi3E0CZH3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Foxi3E0CZH3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.13■□□□□ 0.81
Foxi3E0CZH3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Foxi3E0CZH3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Foxi3E0CZH3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
Foxi3E0CZH3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Foxi3E0CZH3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Foxi3E0CZH3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Foxi3E0CZH3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Foxi3E0CZH3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Foxi3E0CZH3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.07■□□□□ 0.8
Foxi3E0CZH3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Foxi3E0CZH3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxi3E0CZH3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxi3E0CZH3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxi3E0CZH3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Foxi3E0CZH3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Foxi3E0CZH3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxi3E0CZH3 Gm27325-201ENSMUST00000175467 74 ntBASIC20.02■□□□□ 0.8
Foxi3E0CZH3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Foxi3E0CZH3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxi3E0CZH3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxi3E0CZH3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.97■□□□□ 0.79
Foxi3E0CZH3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Foxi3E0CZH3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxi3E0CZH3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxi3E0CZH3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxi3E0CZH3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Foxi3E0CZH3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxi3E0CZH3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxi3E0CZH3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Foxi3E0CZH3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
Foxi3E0CZH3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Foxi3E0CZH3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Foxi3E0CZH3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Foxi3E0CZH3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
Foxi3E0CZH3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Foxi3E0CZH3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Foxi3E0CZH3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Foxi3E0CZH3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Foxi3E0CZH3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Foxi3E0CZH3 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.89■□□□□ 0.77
Foxi3E0CZH3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Foxi3E0CZH3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Foxi3E0CZH3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Foxi3E0CZH3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Foxi3E0CZH3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Foxi3E0CZH3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Foxi3E0CZH3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.84■□□□□ 0.77
Foxi3E0CZH3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms