Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
Trav23A0A0G2JG17 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trav23A0A0G2JG17 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trav23A0A0G2JG17 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Trav23A0A0G2JG17 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trav23A0A0G2JG17 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trav23A0A0G2JG17 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.21■■□□□ 1.15
Trav23A0A0G2JG17 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trav23A0A0G2JG17 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.17■■□□□ 1.14
Trav23A0A0G2JG17 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trav23A0A0G2JG17 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.16■■□□□ 1.14
Trav23A0A0G2JG17 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Trav23A0A0G2JG17 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trav23A0A0G2JG17 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.15■■□□□ 1.14
Trav23A0A0G2JG17 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.15■■□□□ 1.14
Trav23A0A0G2JG17 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trav23A0A0G2JG17 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Trav23A0A0G2JG17 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Trav23A0A0G2JG17 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.08■■□□□ 1.13
Trav23A0A0G2JG17 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trav23A0A0G2JG17 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Trav23A0A0G2JG17 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trav23A0A0G2JG17 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trav23A0A0G2JG17 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Trav23A0A0G2JG17 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trav23A0A0G2JG17 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.99■■□□□ 1.11
Trav23A0A0G2JG17 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trav23A0A0G2JG17 Gm26115-201ENSMUST00000175605 87 ntBASIC21.95■■□□□ 1.1
Trav23A0A0G2JG17 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trav23A0A0G2JG17 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trav23A0A0G2JG17 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trav23A0A0G2JG17 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trav23A0A0G2JG17 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trav23A0A0G2JG17 Gm8109-201ENSMUST00000194076 746 ntBASIC21.88■■□□□ 1.09
Trav23A0A0G2JG17 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.85■■□□□ 1.09
Trav23A0A0G2JG17 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trav23A0A0G2JG17 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trav23A0A0G2JG17 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trav23A0A0G2JG17 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trav23A0A0G2JG17 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.77■■□□□ 1.08
Trav23A0A0G2JG17 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trav23A0A0G2JG17 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Trav23A0A0G2JG17 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trav23A0A0G2JG17 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trav23A0A0G2JG17 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trav23A0A0G2JG17 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trav23A0A0G2JG17 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Trav23A0A0G2JG17 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trav23A0A0G2JG17 Gm27322-201ENSMUST00000184007 104 ntBASIC21.7■■□□□ 1.06
Trav23A0A0G2JG17 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Trav23A0A0G2JG17 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Trav23A0A0G2JG17 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trav23A0A0G2JG17 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Trav23A0A0G2JG17 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trav23A0A0G2JG17 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.64■■□□□ 1.05
Trav23A0A0G2JG17 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
Trav23A0A0G2JG17 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav23A0A0G2JG17 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.58■■□□□ 1.05
Trav23A0A0G2JG17 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.58■■□□□ 1.05
Trav23A0A0G2JG17 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Trav23A0A0G2JG17 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.55■■□□□ 1.04
Trav23A0A0G2JG17 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trav23A0A0G2JG17 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trav23A0A0G2JG17 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trav23A0A0G2JG17 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trav23A0A0G2JG17 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav23A0A0G2JG17 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trav23A0A0G2JG17 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trav23A0A0G2JG17 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trav23A0A0G2JG17 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trav23A0A0G2JG17 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trav23A0A0G2JG17 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trav23A0A0G2JG17 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.37■■□□□ 1.01
Trav23A0A0G2JG17 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Trav23A0A0G2JG17 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trav23A0A0G2JG17 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.36■■□□□ 1.01
Trav23A0A0G2JG17 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trav23A0A0G2JG17 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trav23A0A0G2JG17 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trav23A0A0G2JG17 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trav23A0A0G2JG17 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Trav23A0A0G2JG17 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trav23A0A0G2JG17 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trav23A0A0G2JG17 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.26■□□□□ 0.99
Trav23A0A0G2JG17 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trav23A0A0G2JG17 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trav23A0A0G2JG17 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trav23A0A0G2JG17 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trav23A0A0G2JG17 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trav23A0A0G2JG17 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Trav23A0A0G2JG17 Mipep-204ENSMUST00000225043 1548 ntBASIC21.22■□□□□ 0.99
Trav23A0A0G2JG17 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trav23A0A0G2JG17 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Trav23A0A0G2JG17 Gm24804-201ENSMUST00000174982 85 ntBASIC21.18■□□□□ 0.98
Trav23A0A0G2JG17 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trav23A0A0G2JG17 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav23A0A0G2JG17 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trav23A0A0G2JG17 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trav23A0A0G2JG17 Zxda-201ENSMUST00000117281 2621 ntBASIC21.14■□□□□ 0.97
Trav23A0A0G2JG17 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms