Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20,36■□□□□ 0,85
Trav3n-3A0A0G2JEM0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20,36■□□□□ 0,85
Trav3n-3A0A0G2JEM0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20,34■□□□□ 0,85
Trav3n-3A0A0G2JEM0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20,31■□□□□ 0,84
Trav3n-3A0A0G2JEM0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20,3■□□□□ 0,84
Trav3n-3A0A0G2JEM0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20,29■□□□□ 0,84
Trav3n-3A0A0G2JEM0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20,29■□□□□ 0,84
Trav3n-3A0A0G2JEM0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20,27■□□□□ 0,84
Trav3n-3A0A0G2JEM0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20,27■□□□□ 0,83
Trav3n-3A0A0G2JEM0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20,26■□□□□ 0,83
Trav3n-3A0A0G2JEM0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20,26■□□□□ 0,83
Trav3n-3A0A0G2JEM0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20,26■□□□□ 0,83
Trav3n-3A0A0G2JEM0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20,26■□□□□ 0,83
Trav3n-3A0A0G2JEM0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20,25■□□□□ 0,83
Trav3n-3A0A0G2JEM0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20,25■□□□□ 0,83
Trav3n-3A0A0G2JEM0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20,25■□□□□ 0,83
Trav3n-3A0A0G2JEM0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20,22■□□□□ 0,83
Trav3n-3A0A0G2JEM0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20,19■□□□□ 0,82
Trav3n-3A0A0G2JEM0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20,16■□□□□ 0,82
Trav3n-3A0A0G2JEM0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20,16■□□□□ 0,82
Trav3n-3A0A0G2JEM0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20,14■□□□□ 0,81
Trav3n-3A0A0G2JEM0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20,13■□□□□ 0,81
Trav3n-3A0A0G2JEM0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20,11■□□□□ 0,81
Trav3n-3A0A0G2JEM0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20,11■□□□□ 0,81
Trav3n-3A0A0G2JEM0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20,09■□□□□ 0,81
Trav3n-3A0A0G2JEM0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20,08■□□□□ 0,8
Trav3n-3A0A0G2JEM0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20,05■□□□□ 0,8
Trav3n-3A0A0G2JEM0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20,03■□□□□ 0,8
Trav3n-3A0A0G2JEM0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20,03■□□□□ 0,8
Trav3n-3A0A0G2JEM0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20,02■□□□□ 0,8
Trav3n-3A0A0G2JEM0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0,79
Trav3n-3A0A0G2JEM0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19,99■□□□□ 0,79
Trav3n-3A0A0G2JEM0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19,98■□□□□ 0,79
Trav3n-3A0A0G2JEM0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19,97■□□□□ 0,79
Trav3n-3A0A0G2JEM0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19,96■□□□□ 0,79
Trav3n-3A0A0G2JEM0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19,95■□□□□ 0,78
Trav3n-3A0A0G2JEM0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19,94■□□□□ 0,78
Trav3n-3A0A0G2JEM0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19,93■□□□□ 0,78
Trav3n-3A0A0G2JEM0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19,92■□□□□ 0,78
Trav3n-3A0A0G2JEM0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19,89■□□□□ 0,77
Trav3n-3A0A0G2JEM0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19,89■□□□□ 0,77
Trav3n-3A0A0G2JEM0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19,88■□□□□ 0,77
Trav3n-3A0A0G2JEM0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19,87■□□□□ 0,77
Trav3n-3A0A0G2JEM0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19,86■□□□□ 0,77
Trav3n-3A0A0G2JEM0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19,85■□□□□ 0,77
Trav3n-3A0A0G2JEM0 Gm27325-201ENSMUST00000175467 74 ntBASIC19,85■□□□□ 0,77
Trav3n-3A0A0G2JEM0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19,82■□□□□ 0,76
Trav3n-3A0A0G2JEM0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19,8■□□□□ 0,76
Trav3n-3A0A0G2JEM0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19,8■□□□□ 0,76
Trav3n-3A0A0G2JEM0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19,79■□□□□ 0,76
Trav3n-3A0A0G2JEM0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19,79■□□□□ 0,76
Trav3n-3A0A0G2JEM0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19,79■□□□□ 0,76
Trav3n-3A0A0G2JEM0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19,77■□□□□ 0,76
Trav3n-3A0A0G2JEM0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19,74■□□□□ 0,75
Trav3n-3A0A0G2JEM0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19,73■□□□□ 0,75
Trav3n-3A0A0G2JEM0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19,7■□□□□ 0,74
Trav3n-3A0A0G2JEM0 Gm9905-201ENSMUST00000065740 1845 ntBASIC19,7■□□□□ 0,74
Trav3n-3A0A0G2JEM0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19,68■□□□□ 0,74
Trav3n-3A0A0G2JEM0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19,66■□□□□ 0,74
Trav3n-3A0A0G2JEM0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19,66■□□□□ 0,74
Trav3n-3A0A0G2JEM0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19,65■□□□□ 0,74
Trav3n-3A0A0G2JEM0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19,65■□□□□ 0,74
Trav3n-3A0A0G2JEM0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19,64■□□□□ 0,74
Trav3n-3A0A0G2JEM0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19,63■□□□□ 0,73
Trav3n-3A0A0G2JEM0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19,63■□□□□ 0,73
Trav3n-3A0A0G2JEM0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19,63■□□□□ 0,73
Trav3n-3A0A0G2JEM0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19,62■□□□□ 0,73
Trav3n-3A0A0G2JEM0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19,61■□□□□ 0,73
Trav3n-3A0A0G2JEM0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19,61■□□□□ 0,73
Trav3n-3A0A0G2JEM0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19,6■□□□□ 0,73
Trav3n-3A0A0G2JEM0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19,6■□□□□ 0,73
Trav3n-3A0A0G2JEM0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19,6■□□□□ 0,73
Trav3n-3A0A0G2JEM0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19,58■□□□□ 0,72
Trav3n-3A0A0G2JEM0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19,57■□□□□ 0,72
Trav3n-3A0A0G2JEM0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19,56■□□□□ 0,72
Trav3n-3A0A0G2JEM0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19,55■□□□□ 0,72
Trav3n-3A0A0G2JEM0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19,54■□□□□ 0,72
Trav3n-3A0A0G2JEM0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19,54■□□□□ 0,72
Trav3n-3A0A0G2JEM0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19,52■□□□□ 0,71
Trav3n-3A0A0G2JEM0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19,52■□□□□ 0,71
Trav3n-3A0A0G2JEM0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19,51■□□□□ 0,71
Trav3n-3A0A0G2JEM0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19,51■□□□□ 0,71
Trav3n-3A0A0G2JEM0 Gm25238-201ENSMUST00000174914 89 ntBASIC19,5■□□□□ 0,71
Trav3n-3A0A0G2JEM0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19,5■□□□□ 0,71
Trav3n-3A0A0G2JEM0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19,49■□□□□ 0,71
Trav3n-3A0A0G2JEM0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19,49■□□□□ 0,71
Trav3n-3A0A0G2JEM0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19,49■□□□□ 0,71
Trav3n-3A0A0G2JEM0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19,48■□□□□ 0,71
Trav3n-3A0A0G2JEM0 Gm6206-201ENSMUST00000133472 2199 ntBASIC19,48■□□□□ 0,71
Trav3n-3A0A0G2JEM0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19,47■□□□□ 0,71
Trav3n-3A0A0G2JEM0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19,46■□□□□ 0,71
Trav3n-3A0A0G2JEM0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19,45■□□□□ 0,7
Trav3n-3A0A0G2JEM0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19,45■□□□□ 0,7
Trav3n-3A0A0G2JEM0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19,43■□□□□ 0,7
Trav3n-3A0A0G2JEM0 Gm2415-204ENSMUST00000190235 2004 ntBASIC19,42■□□□□ 0,7
Trav3n-3A0A0G2JEM0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19,42■□□□□ 0,7
Trav3n-3A0A0G2JEM0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19,42■□□□□ 0,7
Trav3n-3A0A0G2JEM0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19,42■□□□□ 0,7
Trav3n-3A0A0G2JEM0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19,41■□□□□ 0,7
Trav3n-3A0A0G2JEM0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19,4■□□□□ 0,7
Retrieved 100 of 76,532 protein–RNA pairs in 10,8 ms