Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav6n-6A0A075B6B2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav6n-6A0A075B6B2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.04■□□□□ 0.8
Trav6n-6A0A075B6B2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Trav6n-6A0A075B6B2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Trav6n-6A0A075B6B2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav6n-6A0A075B6B2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav6n-6A0A075B6B2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav6n-6A0A075B6B2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav6n-6A0A075B6B2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trav6n-6A0A075B6B2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav6n-6A0A075B6B2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.96■□□□□ 0.79
Trav6n-6A0A075B6B2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav6n-6A0A075B6B2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav6n-6A0A075B6B2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trav6n-6A0A075B6B2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav6n-6A0A075B6B2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trav6n-6A0A075B6B2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav6n-6A0A075B6B2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav6n-6A0A075B6B2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Trav6n-6A0A075B6B2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.87■□□□□ 0.77
Trav6n-6A0A075B6B2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Trav6n-6A0A075B6B2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav6n-6A0A075B6B2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.85■□□□□ 0.77
Trav6n-6A0A075B6B2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trav6n-6A0A075B6B2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav6n-6A0A075B6B2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav6n-6A0A075B6B2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav6n-6A0A075B6B2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trav6n-6A0A075B6B2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.82■□□□□ 0.76
Trav6n-6A0A075B6B2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav6n-6A0A075B6B2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav6n-6A0A075B6B2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav6n-6A0A075B6B2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav6n-6A0A075B6B2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav6n-6A0A075B6B2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav6n-6A0A075B6B2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.75■□□□□ 0.75
Trav6n-6A0A075B6B2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav6n-6A0A075B6B2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav6n-6A0A075B6B2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav6n-6A0A075B6B2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Trav6n-6A0A075B6B2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav6n-6A0A075B6B2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav6n-6A0A075B6B2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav6n-6A0A075B6B2 Rab21-202ENSMUST00000218831 843 ntBASIC19.59■□□□□ 0.73
Trav6n-6A0A075B6B2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.57■□□□□ 0.72
Trav6n-6A0A075B6B2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav6n-6A0A075B6B2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav6n-6A0A075B6B2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav6n-6A0A075B6B2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trav6n-6A0A075B6B2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6n-6A0A075B6B2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6n-6A0A075B6B2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.51■□□□□ 0.71
Trav6n-6A0A075B6B2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav6n-6A0A075B6B2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav6n-6A0A075B6B2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav6n-6A0A075B6B2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.46■□□□□ 0.71
Trav6n-6A0A075B6B2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav6n-6A0A075B6B2 Gm25262-201ENSMUST00000174934 133 ntBASIC19.43■□□□□ 0.7
Trav6n-6A0A075B6B2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav6n-6A0A075B6B2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trav6n-6A0A075B6B2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav6n-6A0A075B6B2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav6n-6A0A075B6B2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav6n-6A0A075B6B2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6n-6A0A075B6B2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav6n-6A0A075B6B2 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.35■□□□□ 0.69
Trav6n-6A0A075B6B2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav6n-6A0A075B6B2 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.34■□□□□ 0.69
Trav6n-6A0A075B6B2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav6n-6A0A075B6B2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6n-6A0A075B6B2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.3■□□□□ 0.68
Trav6n-6A0A075B6B2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trav6n-6A0A075B6B2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav6n-6A0A075B6B2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav6n-6A0A075B6B2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trav6n-6A0A075B6B2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav6n-6A0A075B6B2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav6n-6A0A075B6B2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6n-6A0A075B6B2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.23■□□□□ 0.67
Trav6n-6A0A075B6B2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav6n-6A0A075B6B2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav6n-6A0A075B6B2 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.22■□□□□ 0.67
Trav6n-6A0A075B6B2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav6n-6A0A075B6B2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav6n-6A0A075B6B2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav6n-6A0A075B6B2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav6n-6A0A075B6B2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav6n-6A0A075B6B2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav6n-6A0A075B6B2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6n-6A0A075B6B2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav6n-6A0A075B6B2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6n-6A0A075B6B2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.14■□□□□ 0.65
Trav6n-6A0A075B6B2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.13■□□□□ 0.65
Trav6n-6A0A075B6B2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.13■□□□□ 0.65
Trav6n-6A0A075B6B2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav6n-6A0A075B6B2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6n-6A0A075B6B2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
Trav6n-6A0A075B6B2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trav6n-6A0A075B6B2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms