Protein–RNA interactions for Protein: S4R181

Ccdc166, Coiled-coil domain-containing 166, mousemouse

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc166S4R181 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.43□□□□□ -0.42
Ccdc166S4R181 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Gm16379-201ENSMUST00000161469 348 ntBASIC12.43□□□□□ -0.42
Ccdc166S4R181 Gm8762-201ENSMUST00000193486 339 ntBASIC12.43□□□□□ -0.42
Ccdc166S4R181 Gm38341-201ENSMUST00000195357 515 ntBASIC12.43□□□□□ -0.42
Ccdc166S4R181 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.43□□□□□ -0.42
Ccdc166S4R181 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccdc166S4R181 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc166S4R181 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.42□□□□□ -0.42
Ccdc166S4R181 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ccdc166S4R181 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Gm17208-201ENSMUST00000168388 535 ntBASIC12.42□□□□□ -0.42
Ccdc166S4R181 Mir3547-201ENSMUST00000175461 88 ntBASIC12.42□□□□□ -0.42
Ccdc166S4R181 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.42□□□□□ -0.42
Ccdc166S4R181 Gm43133-201ENSMUST00000197472 463 ntBASIC12.42□□□□□ -0.42
Ccdc166S4R181 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.42□□□□□ -0.42
Ccdc166S4R181 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Snora73a-201ENSMUST00000082453 205 ntBASIC12.42□□□□□ -0.42
Ccdc166S4R181 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.42□□□□□ -0.42
Ccdc166S4R181 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.42□□□□□ -0.42
Ccdc166S4R181 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc166S4R181 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc166S4R181 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc166S4R181 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc166S4R181 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc166S4R181 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc166S4R181 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Ccdc166S4R181 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc166S4R181 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc166S4R181 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc166S4R181 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc166S4R181 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc166S4R181 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms