Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scn11aQ9R053 Gm44136-201ENSMUST00000203819 1106 ntBASIC15.08■□□□□ 0.01
Scn11aQ9R053 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC15.08■□□□□ 0.01
Scn11aQ9R053 Grk6-205ENSMUST00000224653 2976 ntBASIC15.08■□□□□ 0.01
Scn11aQ9R053 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scn11aQ9R053 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scn11aQ9R053 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scn11aQ9R053 CU062626.3-201ENSMUST00000225522 1411 ntBASIC15.08■□□□□ 0.01
Scn11aQ9R053 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.08■□□□□ 0.01
Scn11aQ9R053 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
Scn11aQ9R053 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scn11aQ9R053 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.08■□□□□ 0.01
Scn11aQ9R053 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn11aQ9R053 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Scn11aQ9R053 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn11aQ9R053 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Scn11aQ9R053 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Scn11aQ9R053 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Scn11aQ9R053 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Scn11aQ9R053 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn11aQ9R053 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scn11aQ9R053 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scn11aQ9R053 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scn11aQ9R053 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC15.08■□□□□ 0
Scn11aQ9R053 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC15.08■□□□□ 0
Scn11aQ9R053 Gm6335-201ENSMUST00000118081 1194 ntBASIC15.08■□□□□ 0
Scn11aQ9R053 Gm7816-201ENSMUST00000119884 1194 ntBASIC15.08■□□□□ 0
Scn11aQ9R053 Gm15542-201ENSMUST00000121585 1194 ntBASIC15.08■□□□□ 0
Scn11aQ9R053 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC15.08■□□□□ 0
Scn11aQ9R053 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC15.08■□□□□ 0
Scn11aQ9R053 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC15.08■□□□□ 0
Scn11aQ9R053 Gm44651-201ENSMUST00000207343 372 ntBASIC15.08■□□□□ 0
Scn11aQ9R053 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC15.08■□□□□ 0
Scn11aQ9R053 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn11aQ9R053 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn11aQ9R053 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Scn11aQ9R053 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Scn11aQ9R053 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Gm14760-201ENSMUST00000121831 999 ntBASIC15.07■□□□□ 0
Scn11aQ9R053 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Scn11aQ9R053 Gm18893-201ENSMUST00000198416 943 ntBASIC15.07■□□□□ 0
Scn11aQ9R053 Gm45598-202ENSMUST00000210719 986 ntBASIC15.07■□□□□ 0
Scn11aQ9R053 AC135469.1-201ENSMUST00000225984 772 ntBASIC15.07■□□□□ 0
Scn11aQ9R053 Spcs1-203ENSMUST00000226374 592 ntBASIC15.07■□□□□ 0
Scn11aQ9R053 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Scn11aQ9R053 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn11aQ9R053 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC15.06■□□□□ 0
Scn11aQ9R053 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Scn11aQ9R053 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.06■□□□□ 0
Scn11aQ9R053 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.06■□□□□ 0
Scn11aQ9R053 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC15.06■□□□□ 0
Scn11aQ9R053 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC15.06■□□□□ 0
Scn11aQ9R053 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC15.06■□□□□ 0
Scn11aQ9R053 Dhrs4-202ENSMUST00000226168 828 ntBASIC15.06■□□□□ 0
Scn11aQ9R053 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC15.06■□□□□ 0
Scn11aQ9R053 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.06■□□□□ 0
Scn11aQ9R053 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Scn11aQ9R053 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scn11aQ9R053 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms