Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cpsf3Q9QXK7 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.92□□□□□ -0.18
Cpsf3Q9QXK7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf3Q9QXK7 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf3Q9QXK7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Gm8099-201ENSMUST00000200510 742 ntBASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.91□□□□□ -0.18
Cpsf3Q9QXK7 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 Gm3890-201ENSMUST00000182416 207 ntBASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 Gm27572-201ENSMUST00000183702 255 ntBASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 Gm45880-201ENSMUST00000213041 853 ntBASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf3Q9QXK7 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cpsf3Q9QXK7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Gm18584-201ENSMUST00000203098 964 ntBASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf3Q9QXK7 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms