Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.02□□□□□ -0.17
Trim54Q9ERP3 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.02□□□□□ -0.17
Trim54Q9ERP3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim54Q9ERP3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim54Q9ERP3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.02□□□□□ -0.17
Trim54Q9ERP3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim54Q9ERP3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim54Q9ERP3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim54Q9ERP3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim54Q9ERP3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim54Q9ERP3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim54Q9ERP3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim54Q9ERP3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trim54Q9ERP3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim54Q9ERP3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim54Q9ERP3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim54Q9ERP3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim54Q9ERP3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim54Q9ERP3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trim54Q9ERP3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Gm10434-201ENSMUST00000101158 471 ntBASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Gm11964-201ENSMUST00000120982 444 ntBASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Gm22121-201ENSMUST00000175148 54 ntBASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Gm29199-201ENSMUST00000187766 775 ntBASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim54Q9ERP3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim54Q9ERP3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14□□□□□ -0.17
Trim54Q9ERP3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14□□□□□ -0.17
Trim54Q9ERP3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Gm14752-201ENSMUST00000120719 2075 ntBASIC14□□□□□ -0.17
Trim54Q9ERP3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14□□□□□ -0.17
Trim54Q9ERP3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14□□□□□ -0.17
Trim54Q9ERP3 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Gm14704-201ENSMUST00000120300 874 ntBASIC14□□□□□ -0.17
Trim54Q9ERP3 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14□□□□□ -0.17
Trim54Q9ERP3 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14□□□□□ -0.17
Trim54Q9ERP3 Gm8176-201ENSMUST00000191297 1099 ntBASIC14□□□□□ -0.17
Trim54Q9ERP3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14□□□□□ -0.17
Trim54Q9ERP3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim54Q9ERP3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14□□□□□ -0.17
Trim54Q9ERP3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14□□□□□ -0.17
Trim54Q9ERP3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim54Q9ERP3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms