Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Gm12015-201ENSMUST00000117065 843 ntBASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Gm11667-201ENSMUST00000119828 486 ntBASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Gm45219-201ENSMUST00000205602 465 ntBASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Gm12380-201ENSMUST00000119012 544 ntBASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cldnd1Q9CQX5 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Gm15711-201ENSMUST00000118889 535 ntBASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Gm11450-201ENSMUST00000121144 333 ntBASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Gm19353-201ENSMUST00000184561 445 ntBASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Gm28882-201ENSMUST00000185504 314 ntBASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms