Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.81□□□□□ -0.36
Vsx1Q91V10 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx1Q91V10 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx1Q91V10 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vsx1Q91V10 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Gm5950-201ENSMUST00000213337 772 ntBASIC12.8□□□□□ -0.36
Vsx1Q91V10 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.8□□□□□ -0.36
Vsx1Q91V10 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vsx1Q91V10 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx1Q91V10 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vsx1Q91V10 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Gm13665-201ENSMUST00000120830 528 ntBASIC12.79□□□□□ -0.36
Vsx1Q91V10 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Gm7467-201ENSMUST00000185173 652 ntBASIC12.79□□□□□ -0.36
Vsx1Q91V10 Gm37835-201ENSMUST00000193305 361 ntBASIC12.79□□□□□ -0.36
Vsx1Q91V10 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.79□□□□□ -0.36
Vsx1Q91V10 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.79□□□□□ -0.36
Vsx1Q91V10 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.79□□□□□ -0.36
Vsx1Q91V10 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.79□□□□□ -0.36
Vsx1Q91V10 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vsx1Q91V10 Acot6-202ENSMUST00000222921 3622 ntBASIC12.79□□□□□ -0.36
Vsx1Q91V10 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.78□□□□□ -0.36
Vsx1Q91V10 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 123.5 ms