Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Rpa1Q8VEE4 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rpa1Q8VEE4 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Rpa1Q8VEE4 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rpa1Q8VEE4 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.08□□□□□ -0.31
Rpa1Q8VEE4 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rpa1Q8VEE4 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rpa1Q8VEE4 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Rpa1Q8VEE4 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rpa1Q8VEE4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Gm12585-201ENSMUST00000117307 290 ntBASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Gm12403-201ENSMUST00000121384 959 ntBASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Gm28630-201ENSMUST00000187806 498 ntBASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rpa1Q8VEE4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Gm10253-201ENSMUST00000194270 940 ntBASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.07□□□□□ -0.32
Rpa1Q8VEE4 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms