Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Gm5177-201ENSMUST00000183092 997 ntBASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Gm6443-201ENSMUST00000203599 874 ntBASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc9Q8VC31 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 AC159195.3-201ENSMUST00000225162 2211 ntBASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Gm27301-201ENSMUST00000184012 127 ntBASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Gm37230-201ENSMUST00000194491 818 ntBASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Gm38140-201ENSMUST00000193617 2755 ntBASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc9Q8VC31 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccdc9Q8VC31 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc9Q8VC31 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccdc9Q8VC31 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc9Q8VC31 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc9Q8VC31 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc9Q8VC31 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc9Q8VC31 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Ccdc9Q8VC31 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ccdc9Q8VC31 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccdc9Q8VC31 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.53■□□□□ 0.08
Ccdc9Q8VC31 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc9Q8VC31 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc9Q8VC31 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
Ccdc9Q8VC31 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms