Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Gm6152-201ENSMUST00000151704 340 ntBASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Mir6956-201ENSMUST00000183598 62 ntBASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Gm18307-201ENSMUST00000206864 949 ntBASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Gm8227-201ENSMUST00000223306 571 ntBASIC14.13□□□□□ -0.15
Sox30Q8CGW4 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Gm15703-201ENSMUST00000120250 880 ntBASIC14.12□□□□□ -0.15
Sox30Q8CGW4 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.12□□□□□ -0.15
Sox30Q8CGW4 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Gm28631-201ENSMUST00000190740 334 ntBASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox30Q8CGW4 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Sox30Q8CGW4 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox30Q8CGW4 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms