Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Mir449b-201ENSMUST00000104833 80 ntBASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Gm43703-201ENSMUST00000200523 763 ntBASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Gm27741-201ENSMUST00000185060 237 ntBASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Gm38144-201ENSMUST00000192790 465 ntBASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Gm5161-201ENSMUST00000075243 853 ntBASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc28bQ8CEG5 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Gm27525-201ENSMUST00000184465 107 ntBASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Gm27321-201ENSMUST00000185021 205 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms