Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Gm11424-201ENSMUST00000121929 829 ntBASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Gm10766-202ENSMUST00000194123 606 ntBASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Gm15823-201ENSMUST00000064305 670 ntBASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrif1Q8CDD9 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Gm6912-201ENSMUST00000117218 544 ntBASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Gm5745-201ENSMUST00000183748 313 ntBASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrif1Q8CDD9 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Gm42612-201ENSMUST00000197986 623 ntBASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Gm43170-201ENSMUST00000199827 612 ntBASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lrif1Q8CDD9 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms