Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rd3Q8BRE0 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rd3Q8BRE0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rd3Q8BRE0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rd3Q8BRE0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rd3Q8BRE0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rd3Q8BRE0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.71□□□□□ -0.21
Rd3Q8BRE0 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Gm5363-201ENSMUST00000211927 938 ntBASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rd3Q8BRE0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.71□□□□□ -0.22
Rd3Q8BRE0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rd3Q8BRE0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rd3Q8BRE0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rd3Q8BRE0 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rd3Q8BRE0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rd3Q8BRE0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Gm2546-201ENSMUST00000182630 991 ntBASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rd3Q8BRE0 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.69□□□□□ -0.22
Rd3Q8BRE0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms