Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Gm18766-201ENSMUST00000189811 808 ntBASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 AC131710.1-201ENSMUST00000228336 990 ntBASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smco3Q8BQM7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Smco3Q8BQM7 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Smco3Q8BQM7 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Smco3Q8BQM7 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Smco3Q8BQM7 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Smco3Q8BQM7 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Smco3Q8BQM7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Smco3Q8BQM7 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Smco3Q8BQM7 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Gm18889-201ENSMUST00000174284 929 ntBASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Gm16476-201ENSMUST00000221544 139 ntBASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Smco3Q8BQM7 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms