Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Gm29705-201ENSMUST00000212598 474 ntBASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Gm9396-201ENSMUST00000076703 567 ntBASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Srrm4Q8BKA3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Mir7221-201ENSMUST00000184009 72 ntBASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Gm37922-201ENSMUST00000195596 455 ntBASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Gm37497-201ENSMUST00000195830 798 ntBASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Srrm4Q8BKA3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Gm13369-201ENSMUST00000119442 987 ntBASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Gm16177-201ENSMUST00000120728 718 ntBASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Mir1982-201ENSMUST00000157368 74 ntBASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Gm18062-201ENSMUST00000208020 547 ntBASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Gm18055-201ENSMUST00000208254 547 ntBASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Srrm4Q8BKA3 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms