Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Samm50Q8BGH2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Gm38144-201ENSMUST00000192790 465 ntBASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Gm8463-201ENSMUST00000208573 613 ntBASIC15.18■□□□□ 0.02
Samm50Q8BGH2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Samm50Q8BGH2 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Gm14127-201ENSMUST00000117906 678 ntBASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.17■□□□□ 0.02
Samm50Q8BGH2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Gm38671-201ENSMUST00000200573 130 ntBASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Samm50Q8BGH2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Gm4984-201ENSMUST00000115987 360 ntBASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Gm27839-201ENSMUST00000184242 106 ntBASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Gm29608-201ENSMUST00000190444 463 ntBASIC15.16■□□□□ 0.02
Samm50Q8BGH2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms