Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Gm43378-201ENSMUST00000199336 582 ntBASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Mir497b-201ENSMUST00000093601 125 ntBASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Prpf38bQ80SY5 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Mir686-201ENSMUST00000102174 109 ntBASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Gm8927-201ENSMUST00000181978 981 ntBASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Gm37835-201ENSMUST00000193305 361 ntBASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Gm42550-201ENSMUST00000201553 960 ntBASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prpf38bQ80SY5 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Gm11964-201ENSMUST00000120982 444 ntBASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Thoc7-209ENSMUST00000225325 765 ntBASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Itm2b-204ENSMUST00000228637 783 ntBASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prpf38bQ80SY5 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms